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TMEM102 (transmembrane protein 102)

Identity

Alias (NCBI)CBAP
HGNC (Hugo) TMEM102
HGNC Alias symbFLJ36878
CBAP
HGNC Alias namecommon beta-chain-associated protein
LocusID (NCBI) 284114
Atlas_Id 57945
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7435435 and ends at 7437679 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM102   26722
Cards
Entrez_Gene (NCBI)TMEM102    transmembrane protein 102
AliasesCBAP
GeneCards (Weizmann)TMEM102
Ensembl hg19 (Hinxton)ENSG00000181284 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181284 [Gene_View]  ENSG00000181284 [Sequence]  chr17:7435435-7437679 [Contig_View]  TMEM102 [Vega]
ICGC DataPortalENSG00000181284
TCGA cBioPortalTMEM102
AceView (NCBI)TMEM102
Genatlas (Paris)TMEM102
SOURCE (Princeton)TMEM102
Genetics Home Reference (NIH)TMEM102
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM102  -     chr17:7435435-7437679 +  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM102  -     17p13.1   [Description]    (hg19-Feb_2009)
GoldenPathTMEM102 - 17p13.1 [CytoView hg19]  TMEM102 - 17p13.1 [CytoView hg38]
ImmunoBaseENSG00000181284
Genome Data Viewer NCBITMEM102 [Mapview hg19]  
OMIM613936   
Gene and transcription
Genbank (Entrez)AK094197 BC046189
RefSeq transcript (Entrez)NM_001320444 NM_178518
Consensus coding sequences : CCDS (NCBI)TMEM102
Gene ExpressionTMEM102 [ NCBI-GEO ]   TMEM102 [ EBI - ARRAY_EXPRESS ]   TMEM102 [ SEEK ]   TMEM102 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM102 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM102 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284114
GTEX Portal (Tissue expression)TMEM102
Human Protein AtlasENSG00000181284-TMEM102 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N9M5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N9M5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N9M5
PhosPhoSitePlusQ8N9M5
Domains : Interpro (EBI)Mab-21_dom    TMEM102   
Domain families : Pfam (Sanger)Mab-21 (PF03281)   
Domain families : Pfam (NCBI)pfam03281   
Domain families : Smart (EMBL)Mab-21 (SM01265)  
Conserved Domain (NCBI)TMEM102
SuperfamilyQ8N9M5
AlphaFold pdb e-kbQ8N9M5   
Human Protein Atlas [tissue]ENSG00000181284-TMEM102 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8N9M5
IntAct (EBI)Q8N9M5
BioGRIDTMEM102
STRING (EMBL)TMEM102
ZODIACTMEM102
Ontologies - Pathways
QuickGOQ8N9M5
Ontology : AmiGOprotein binding  mitochondrion  plasma membrane  apoptotic process  signal transduction  cell surface  positive regulation of T cell chemotaxis  integral component of membrane  protein-containing complex  response to cytokine  regulation of apoptotic process  positive regulation of cell adhesion  regulation of peptidyl-tyrosine phosphorylation  regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  positive regulation of T cell migration  
Ontology : EGO-EBIprotein binding  mitochondrion  plasma membrane  apoptotic process  signal transduction  cell surface  positive regulation of T cell chemotaxis  integral component of membrane  protein-containing complex  response to cytokine  regulation of apoptotic process  positive regulation of cell adhesion  regulation of peptidyl-tyrosine phosphorylation  regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  positive regulation of T cell migration  
NDEx NetworkTMEM102
Atlas of Cancer Signalling NetworkTMEM102
Wikipedia pathwaysTMEM102
Orthology - Evolution
OrthoDB284114
GeneTree (enSembl)ENSG00000181284
Phylogenetic Trees/Animal Genes : TreeFamTMEM102
Homologs : HomoloGeneTMEM102
Homology/Alignments : Family Browser (UCSC)TMEM102
Gene fusions - Rearrangements
Fusion : QuiverTMEM102
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM102 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM102
dbVarTMEM102
ClinVarTMEM102
MonarchTMEM102
1000_GenomesTMEM102 
Exome Variant ServerTMEM102
GNOMAD BrowserENSG00000181284
Varsome BrowserTMEM102
ACMGTMEM102 variants
VarityQ8N9M5
Genomic Variants (DGV)TMEM102 [DGVbeta]
DECIPHERTMEM102 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM102 
Mutations
ICGC Data PortalTMEM102 
TCGA Data PortalTMEM102 
Broad Tumor PortalTMEM102
OASIS PortalTMEM102 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM102  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM102
Mutations and Diseases : HGMDTMEM102
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM102
DgiDB (Drug Gene Interaction Database)TMEM102
DoCM (Curated mutations)TMEM102
CIViC (Clinical Interpretations of Variants in Cancer)TMEM102
Cancer3DTMEM102
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613936   
Orphanet
DisGeNETTMEM102
MedgenTMEM102
Genetic Testing Registry TMEM102
NextProtQ8N9M5 [Medical]
GENETestsTMEM102
Target ValidationTMEM102
Huge Navigator TMEM102 [HugePedia]
ClinGenTMEM102
Clinical trials, drugs, therapy
MyCancerGenomeTMEM102
Protein Interactions : CTDTMEM102
Pharm GKB GenePA142670751
PharosQ8N9M5
Clinical trialTMEM102
Miscellaneous
canSAR (ICR)TMEM102
HarmonizomeTMEM102
DataMed IndexTMEM102
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM102
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:35:22 CEST 2021

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