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TMEM102 (transmembrane protein 102)

Identity

Alias_symbol (synonym)FLJ36878
CBAP
Other alias
HGNC (Hugo) TMEM102
LocusID (NCBI) 284114
Atlas_Id 74770
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7435473 and ends at 7437679 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM102   26722
Cards
Entrez_Gene (NCBI)TMEM102  284114  transmembrane protein 102
AliasesCBAP
GeneCards (Weizmann)TMEM102
Ensembl hg19 (Hinxton)ENSG00000181284 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181284 [Gene_View]  chr17:7435473-7437679 [Contig_View]  TMEM102 [Vega]
ICGC DataPortalENSG00000181284
TCGA cBioPortalTMEM102
AceView (NCBI)TMEM102
Genatlas (Paris)TMEM102
WikiGenes284114
SOURCE (Princeton)TMEM102
Genetics Home Reference (NIH)TMEM102
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM102  -     chr17:7435473-7437679 +  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM102  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM102 - 17p13.1 [CytoView hg19]  TMEM102 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBITMEM102 [Mapview hg19]  TMEM102 [Mapview hg38]
OMIM613936   
Gene and transcription
Genbank (Entrez)AK094197 BC046189
RefSeq transcript (Entrez)NM_001320444 NM_178518
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM102
Cluster EST : UnigeneHs.655662 [ NCBI ]
CGAP (NCI)Hs.655662
Alternative Splicing GalleryENSG00000181284
Gene ExpressionTMEM102 [ NCBI-GEO ]   TMEM102 [ EBI - ARRAY_EXPRESS ]   TMEM102 [ SEEK ]   TMEM102 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM102 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284114
GTEX Portal (Tissue expression)TMEM102
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N9M5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N9M5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N9M5
Splice isoforms : SwissVarQ8N9M5
PhosPhoSitePlusQ8N9M5
Domains : Interpro (EBI)Mab-21_dom    TMEM102   
Domain families : Pfam (Sanger)Mab-21 (PF03281)   
Domain families : Pfam (NCBI)pfam03281   
Domain families : Smart (EMBL)Mab-21 (SM01265)  
Conserved Domain (NCBI)TMEM102
DMDM Disease mutations284114
Blocks (Seattle)TMEM102
SuperfamilyQ8N9M5
Human Protein AtlasENSG00000181284
Peptide AtlasQ8N9M5
HPRD08215
IPIIPI00167764   
Protein Interaction databases
DIP (DOE-UCLA)Q8N9M5
IntAct (EBI)Q8N9M5
FunCoupENSG00000181284
BioGRIDTMEM102
STRING (EMBL)TMEM102
ZODIACTMEM102
Ontologies - Pathways
QuickGOQ8N9M5
Ontology : AmiGOprotein binding  intracellular  mitochondrion  plasma membrane  apoptotic process  signal transduction  cell surface  positive regulation of T cell chemotaxis  integral component of membrane  response to cytokine  protein complex  positive regulation of cell adhesion  regulation of peptidyl-tyrosine phosphorylation  regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  positive regulation of T cell migration  
Ontology : EGO-EBIprotein binding  intracellular  mitochondrion  plasma membrane  apoptotic process  signal transduction  cell surface  positive regulation of T cell chemotaxis  integral component of membrane  response to cytokine  protein complex  positive regulation of cell adhesion  regulation of peptidyl-tyrosine phosphorylation  regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway  positive regulation of T cell migration  
NDEx NetworkTMEM102
Atlas of Cancer Signalling NetworkTMEM102
Wikipedia pathwaysTMEM102
Orthology - Evolution
OrthoDB284114
GeneTree (enSembl)ENSG00000181284
Phylogenetic Trees/Animal Genes : TreeFamTMEM102
HOVERGENQ8N9M5
HOGENOMQ8N9M5
Homologs : HomoloGeneTMEM102
Homology/Alignments : Family Browser (UCSC)TMEM102
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM102 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM102
dbVarTMEM102
ClinVarTMEM102
1000_GenomesTMEM102 
Exome Variant ServerTMEM102
ExAC (Exome Aggregation Consortium)TMEM102 (select the gene name)
Genetic variants : HAPMAP284114
Genomic Variants (DGV)TMEM102 [DGVbeta]
DECIPHERTMEM102 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM102 
Mutations
ICGC Data PortalTMEM102 
TCGA Data PortalTMEM102 
Broad Tumor PortalTMEM102
OASIS PortalTMEM102 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM102  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM102
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM102
DgiDB (Drug Gene Interaction Database)TMEM102
DoCM (Curated mutations)TMEM102 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM102 (select a term)
intoGenTMEM102
Cancer3DTMEM102(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613936   
Orphanet
MedgenTMEM102
Genetic Testing Registry TMEM102
NextProtQ8N9M5 [Medical]
TSGene284114
GENETestsTMEM102
Target ValidationTMEM102
Huge Navigator TMEM102 [HugePedia]
snp3D : Map Gene to Disease284114
BioCentury BCIQTMEM102
ClinGenTMEM102
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284114
Chemical/Pharm GKB GenePA142670751
Clinical trialTMEM102
Miscellaneous
canSAR (ICR)TMEM102 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM102
EVEXTMEM102
GoPubMedTMEM102
iHOPTMEM102
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:45:46 CEST 2017

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