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TMEM105 (transmembrane protein 105)

Identity

Alias_symbol (synonym)FLJ38792
Other alias-
HGNC (Hugo) TMEM105
LocusID (NCBI) 284186
Atlas_Id 74771
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 81311271 and ends at 81330674 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RPTOR (17q25.3) / TMEM105 (17q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM105   26794
Cards
Entrez_Gene (NCBI)TMEM105  284186  transmembrane protein 105
Aliases
GeneCards (Weizmann)TMEM105
Ensembl hg19 (Hinxton)ENSG00000185332 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185332 [Gene_View]  chr17:81311271-81330674 [Contig_View]  TMEM105 [Vega]
ICGC DataPortalENSG00000185332
TCGA cBioPortalTMEM105
AceView (NCBI)TMEM105
Genatlas (Paris)TMEM105
WikiGenes284186
SOURCE (Princeton)TMEM105
Genetics Home Reference (NIH)TMEM105
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM105  -     chr17:81311271-81330674 -  17q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM105  -     17q25.3   [Description]    (hg19-Feb_2009)
EnsemblTMEM105 - 17q25.3 [CytoView hg19]  TMEM105 - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBITMEM105 [Mapview hg19]  TMEM105 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096111 BM998205
RefSeq transcript (Entrez)NM_178520
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM105
Cluster EST : UnigeneHs.364191 [ NCBI ]
CGAP (NCI)Hs.364191
Alternative Splicing GalleryENSG00000185332
Gene ExpressionTMEM105 [ NCBI-GEO ]   TMEM105 [ EBI - ARRAY_EXPRESS ]   TMEM105 [ SEEK ]   TMEM105 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM105 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284186
GTEX Portal (Tissue expression)TMEM105
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8V8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8V8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8V8
Splice isoforms : SwissVarQ8N8V8
PhosPhoSitePlusQ8N8V8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM105
DMDM Disease mutations284186
Blocks (Seattle)TMEM105
SuperfamilyQ8N8V8
Human Protein AtlasENSG00000185332
Peptide AtlasQ8N8V8
HPRD08247
IPIIPI00167604   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8V8
IntAct (EBI)Q8N8V8
FunCoupENSG00000185332
BioGRIDTMEM105
STRING (EMBL)TMEM105
ZODIACTMEM105
Ontologies - Pathways
QuickGOQ8N8V8
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM105
Atlas of Cancer Signalling NetworkTMEM105
Wikipedia pathwaysTMEM105
Orthology - Evolution
OrthoDB284186
GeneTree (enSembl)ENSG00000185332
Phylogenetic Trees/Animal Genes : TreeFamTMEM105
HOVERGENQ8N8V8
HOGENOMQ8N8V8
Homologs : HomoloGeneTMEM105
Homology/Alignments : Family Browser (UCSC)TMEM105
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM105 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM105
dbVarTMEM105
ClinVarTMEM105
1000_GenomesTMEM105 
Exome Variant ServerTMEM105
ExAC (Exome Aggregation Consortium)TMEM105 (select the gene name)
Genetic variants : HAPMAP284186
Genomic Variants (DGV)TMEM105 [DGVbeta]
DECIPHERTMEM105 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM105 
Mutations
ICGC Data PortalTMEM105 
TCGA Data PortalTMEM105 
Broad Tumor PortalTMEM105
OASIS PortalTMEM105 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM105  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM105
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM105
DgiDB (Drug Gene Interaction Database)TMEM105
DoCM (Curated mutations)TMEM105 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM105 (select a term)
intoGenTMEM105
Cancer3DTMEM105(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM105
Genetic Testing Registry TMEM105
NextProtQ8N8V8 [Medical]
TSGene284186
GENETestsTMEM105
Target ValidationTMEM105
Huge Navigator TMEM105 [HugePedia]
snp3D : Map Gene to Disease284186
BioCentury BCIQTMEM105
ClinGenTMEM105
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284186
Chemical/Pharm GKB GenePA142670754
Clinical trialTMEM105
Miscellaneous
canSAR (ICR)TMEM105 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM105
EVEXTMEM105
GoPubMedTMEM105
iHOPTMEM105
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:36 CEST 2017

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