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TMEM105 (TMEM105 long non-coding RNA)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM105
HGNC Alias symbFLJ38792
LocusID (NCBI) 284186
Atlas_Id 74771
Location 17q25.3  [Link to chromosome band 17q25]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
RPTOR (17q25.3) / TMEM105 (17q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM105   26794
Cards
Entrez_Gene (NCBI)TMEM105    TMEM105 long non-coding RNA
Aliases
GeneCards (Weizmann)TMEM105
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  TMEM105 [Vega]
TCGA cBioPortalTMEM105
AceView (NCBI)TMEM105
Genatlas (Paris)TMEM105
SOURCE (Princeton)TMEM105
Genetics Home Reference (NIH)TMEM105
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM105  -  
GoldenPath hg19 (UCSC)TMEM105  -  
GoldenPathTMEM105 - [CytoView hg19]  TMEM105 - [CytoView hg38]
Genome Data Viewer NCBITMEM105 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK096111 BM998205
RefSeq transcript (Entrez)NM_178520
Consensus coding sequences : CCDS (NCBI)TMEM105
Gene ExpressionTMEM105 [ NCBI-GEO ]   TMEM105 [ EBI - ARRAY_EXPRESS ]   TMEM105 [ SEEK ]   TMEM105 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM105 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM105 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284186
GTEX Portal (Tissue expression)TMEM105
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8V8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8V8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8V8
PhosPhoSitePlusQ8N8V8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM105
SuperfamilyQ8N8V8
AlphaFold pdb e-kbQ8N8V8   
HPRD08247
Protein Interaction databases
DIP (DOE-UCLA)Q8N8V8
IntAct (EBI)Q8N8V8
BioGRIDTMEM105
STRING (EMBL)TMEM105
ZODIACTMEM105
Ontologies - Pathways
QuickGOQ8N8V8
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM105
Atlas of Cancer Signalling NetworkTMEM105
Wikipedia pathwaysTMEM105
Orthology - Evolution
OrthoDB284186
Phylogenetic Trees/Animal Genes : TreeFamTMEM105
Homologs : HomoloGeneTMEM105
Homology/Alignments : Family Browser (UCSC)TMEM105
Gene fusions - Rearrangements
Fusion : QuiverTMEM105
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM105 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM105
dbVarTMEM105
ClinVarTMEM105
MonarchTMEM105
1000_GenomesTMEM105 
Exome Variant ServerTMEM105
Varsome BrowserTMEM105
ACMGTMEM105 variants
VarityQ8N8V8
Genomic Variants (DGV)TMEM105 [DGVbeta]
DECIPHERTMEM105 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM105 
Mutations
ICGC Data PortalTMEM105 
TCGA Data PortalTMEM105 
Broad Tumor PortalTMEM105
OASIS PortalTMEM105 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM105  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM105
Mutations and Diseases : HGMDTMEM105
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM105
DgiDB (Drug Gene Interaction Database)TMEM105
DoCM (Curated mutations)TMEM105
CIViC (Clinical Interpretations of Variants in Cancer)TMEM105
Cancer3DTMEM105
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM105
MedgenTMEM105
Genetic Testing Registry TMEM105
NextProtQ8N8V8 [Medical]
GENETestsTMEM105
Target ValidationTMEM105
Huge Navigator TMEM105 [HugePedia]
ClinGenTMEM105
Clinical trials, drugs, therapy
MyCancerGenomeTMEM105
Protein Interactions : CTDTMEM105
Pharm GKB GenePA142670754
PharosQ8N8V8
Clinical trialTMEM105
Miscellaneous
canSAR (ICR)TMEM105
HarmonizomeTMEM105
DataMed IndexTMEM105
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM105
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:43 CEST 2021

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