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TMEM114 (transmembrane protein 114)

Identity

Other alias-
HGNC (Hugo) TMEM114
LocusID (NCBI) 283953
Atlas_Id 74780
Location 16p13.2  [Link to chromosome band 16p13]
Location_base_pair Starts at 8569500 and ends at 8589838 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM114   33227
Cards
Entrez_Gene (NCBI)TMEM114  283953  transmembrane protein 114
Aliases
GeneCards (Weizmann)TMEM114
Ensembl hg19 (Hinxton)ENSG00000232258 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232258 [Gene_View]  chr16:8569500-8589838 [Contig_View]  TMEM114 [Vega]
ICGC DataPortalENSG00000232258
TCGA cBioPortalTMEM114
AceView (NCBI)TMEM114
Genatlas (Paris)TMEM114
WikiGenes283953
SOURCE (Princeton)TMEM114
Genetics Home Reference (NIH)TMEM114
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM114  -     chr16:8569500-8589838 -  16p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM114  -     16p13.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM114 - 16p13.2 [CytoView hg19]  TMEM114 - 16p13.2 [CytoView hg38]
Mapping of homologs : NCBITMEM114 [Mapview hg19]  TMEM114 [Mapview hg38]
OMIM611579   
Gene and transcription
Genbank (Entrez)AI350262 AI733247 AI887966 AW135815 BC150511
RefSeq transcript (Entrez)NM_001146336 NM_001290095 NM_001290097 NM_001290098
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM114
Cluster EST : UnigeneHs.517683 [ NCBI ]
CGAP (NCI)Hs.517683
Alternative Splicing GalleryENSG00000232258
Gene ExpressionTMEM114 [ NCBI-GEO ]   TMEM114 [ EBI - ARRAY_EXPRESS ]   TMEM114 [ SEEK ]   TMEM114 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM114 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283953
GTEX Portal (Tissue expression)TMEM114
Protein : pattern, domain, 3D structure
UniProt/SwissProtB3SHH9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB3SHH9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB3SHH9
Splice isoforms : SwissVarB3SHH9
PhosPhoSitePlusB3SHH9
Domains : Interpro (EBI)PMP22/EMP/MP20/Claudin   
Domain families : Pfam (Sanger)Claudin_2 (PF13903)   
Domain families : Pfam (NCBI)pfam13903   
Conserved Domain (NCBI)TMEM114
DMDM Disease mutations283953
Blocks (Seattle)TMEM114
SuperfamilyB3SHH9
Human Protein AtlasENSG00000232258
Peptide AtlasB3SHH9
IPIIPI00887801   
Protein Interaction databases
DIP (DOE-UCLA)B3SHH9
IntAct (EBI)B3SHH9
FunCoupENSG00000232258
BioGRIDTMEM114
STRING (EMBL)TMEM114
ZODIACTMEM114
Ontologies - Pathways
QuickGOB3SHH9
Ontology : AmiGOintegral component of membrane  apical plasma membrane  apicolateral plasma membrane  
Ontology : EGO-EBIintegral component of membrane  apical plasma membrane  apicolateral plasma membrane  
NDEx NetworkTMEM114
Atlas of Cancer Signalling NetworkTMEM114
Wikipedia pathwaysTMEM114
Orthology - Evolution
OrthoDB283953
GeneTree (enSembl)ENSG00000232258
Phylogenetic Trees/Animal Genes : TreeFamTMEM114
HOVERGENB3SHH9
HOGENOMB3SHH9
Homologs : HomoloGeneTMEM114
Homology/Alignments : Family Browser (UCSC)TMEM114
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM114 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM114
dbVarTMEM114
ClinVarTMEM114
1000_GenomesTMEM114 
Exome Variant ServerTMEM114
ExAC (Exome Aggregation Consortium)TMEM114 (select the gene name)
Genetic variants : HAPMAP283953
Genomic Variants (DGV)TMEM114 [DGVbeta]
DECIPHERTMEM114 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM114 
Mutations
ICGC Data PortalTMEM114 
TCGA Data PortalTMEM114 
Broad Tumor PortalTMEM114
OASIS PortalTMEM114 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM114  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM114
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Eye diseases - LOVD
BioMutasearch TMEM114
DgiDB (Drug Gene Interaction Database)TMEM114
DoCM (Curated mutations)TMEM114 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM114 (select a term)
intoGenTMEM114
Cancer3DTMEM114(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611579   
Orphanet
MedgenTMEM114
Genetic Testing Registry TMEM114
NextProtB3SHH9 [Medical]
TSGene283953
GENETestsTMEM114
Target ValidationTMEM114
Huge Navigator TMEM114 [HugePedia]
snp3D : Map Gene to Disease283953
BioCentury BCIQTMEM114
ClinGenTMEM114
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283953
Chemical/Pharm GKB GenePA162405852
Clinical trialTMEM114
Miscellaneous
canSAR (ICR)TMEM114 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM114
EVEXTMEM114
GoPubMedTMEM114
iHOPTMEM114
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:45:48 CEST 2017

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