TMEM116 (transmembrane protein 116)

2014-11-01  

Identity

HGNC
TMEM116
LOCATION
12q24.13
LOCUSID
89894
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 89894
HGNC: 25084
Ensembl: ENSG00000198270

Variants:

dbSNP: 89894
ClinVar: 89894
TCGA: ENSG00000198270
COSMIC: TMEM116

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000198270ENST00000355445Q8NCL8
ENSG00000198270ENST00000546537F8VP39
ENSG00000198270ENST00000546962F8W1L7
ENSG00000198270ENST00000547878F8VRN7
ENSG00000198270ENST00000549425F8VWU6
ENSG00000198270ENST00000549537G3V1Z3
ENSG00000198270ENST00000550037F8VNZ8
ENSG00000198270ENST00000550233F8VQZ8
ENSG00000198270ENST00000550800S4R388
ENSG00000198270ENST00000550831Q8NCL8
ENSG00000198270ENST00000551297F8VRN7
ENSG00000198270ENST00000552374Q8NCL8

Expression (GTEx)

0
5
10
15
20
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

TMEM116 (transmembrane protein 116)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74782/tmem116