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TMEM121 (transmembrane protein 121)

Identity

Alias_symbol (synonym)MGC4659
hole
Other alias
HGNC (Hugo) TMEM121
LocusID (NCBI) 80757
Atlas_Id 74784
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 105992953 and ends at 105996539 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
TMEM121 (14q32.33) / ZFC3H1 (12q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM121   20511
Cards
Entrez_Gene (NCBI)TMEM121  80757  transmembrane protein 121
Aliaseshole
GeneCards (Weizmann)TMEM121
Ensembl hg19 (Hinxton)ENSG00000184986 [Gene_View]  chr14:105992953-105996539 [Contig_View]  TMEM121 [Vega]
Ensembl hg38 (Hinxton)ENSG00000184986 [Gene_View]  chr14:105992953-105996539 [Contig_View]  TMEM121 [Vega]
ICGC DataPortalENSG00000184986
TCGA cBioPortalTMEM121
AceView (NCBI)TMEM121
Genatlas (Paris)TMEM121
WikiGenes80757
SOURCE (Princeton)TMEM121
Genetics Home Reference (NIH)TMEM121
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM121  -     chr14:105992953-105996539 +  14q32.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM121  -     14q32.33   [Description]    (hg38-Dec_2013)
EnsemblTMEM121 - 14q32.33 [CytoView hg19]  TMEM121 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBITMEM121 [Mapview hg19]  TMEM121 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC004221
RefSeq transcript (Entrez)NM_025268
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)TMEM121
Cluster EST : UnigeneHs.157527 [ NCBI ]
CGAP (NCI)Hs.157527
Alternative Splicing GalleryENSG00000184986
Gene ExpressionTMEM121 [ NCBI-GEO ]   TMEM121 [ EBI - ARRAY_EXPRESS ]   TMEM121 [ SEEK ]   TMEM121 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM121 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80757
GTEX Portal (Tissue expression)TMEM121
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BTD3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BTD3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BTD3
Splice isoforms : SwissVarQ9BTD3
PhosPhoSitePlusQ9BTD3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM121
DMDM Disease mutations80757
Blocks (Seattle)TMEM121
SuperfamilyQ9BTD3
Human Protein AtlasENSG00000184986
Peptide AtlasQ9BTD3
HPRD14652
IPIIPI00019336   
Protein Interaction databases
DIP (DOE-UCLA)Q9BTD3
IntAct (EBI)Q9BTD3
FunCoupENSG00000184986
BioGRIDTMEM121
STRING (EMBL)TMEM121
ZODIACTMEM121
Ontologies - Pathways
QuickGOQ9BTD3
Ontology : AmiGOmolecular_function  cellular_component  biological_process  integral component of membrane  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  integral component of membrane  
NDEx NetworkTMEM121
Atlas of Cancer Signalling NetworkTMEM121
Wikipedia pathwaysTMEM121
Orthology - Evolution
OrthoDB80757
GeneTree (enSembl)ENSG00000184986
Phylogenetic Trees/Animal Genes : TreeFamTMEM121
HOVERGENQ9BTD3
HOGENOMQ9BTD3
Homologs : HomoloGeneTMEM121
Homology/Alignments : Family Browser (UCSC)TMEM121
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM121 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM121
dbVarTMEM121
ClinVarTMEM121
1000_GenomesTMEM121 
Exome Variant ServerTMEM121
ExAC (Exome Aggregation Consortium)TMEM121 (select the gene name)
Genetic variants : HAPMAP80757
Genomic Variants (DGV)TMEM121 [DGVbeta]
DECIPHER (Syndromes)14:105992953-105996539  ENSG00000184986
CONAN: Copy Number AnalysisTMEM121 
Mutations
ICGC Data PortalTMEM121 
TCGA Data PortalTMEM121 
Broad Tumor PortalTMEM121
OASIS PortalTMEM121 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM121  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM121
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM121
DgiDB (Drug Gene Interaction Database)TMEM121
DoCM (Curated mutations)TMEM121 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM121 (select a term)
intoGenTMEM121
Cancer3DTMEM121(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM121
Genetic Testing Registry TMEM121
NextProtQ9BTD3 [Medical]
TSGene80757
GENETestsTMEM121
Huge Navigator TMEM121 [HugePedia]
snp3D : Map Gene to Disease80757
BioCentury BCIQTMEM121
ClinGenTMEM121
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80757
Chemical/Pharm GKB GenePA143485641
Clinical trialTMEM121
Miscellaneous
canSAR (ICR)TMEM121 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM121
EVEXTMEM121
GoPubMedTMEM121
iHOPTMEM121
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:48:24 CET 2017

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