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TMEM125 (transmembrane protein 125)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM125
HGNC Alias symbMGC17299
LocusID (NCBI) 128218
Atlas_Id 74786
Location 1p34.2  [Link to chromosome band 1p34]
Location_base_pair Starts at 43269983 and ends at 43274002 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM125 (1p34.2) / TMEM125 (1p34.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM125   28275
Cards
Entrez_Gene (NCBI)TMEM125    transmembrane protein 125
Aliases
GeneCards (Weizmann)TMEM125
Ensembl hg19 (Hinxton)ENSG00000179178 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179178 [Gene_View]  ENSG00000179178 [Sequence]  chr1:43269983-43274002 [Contig_View]  TMEM125 [Vega]
ICGC DataPortalENSG00000179178
TCGA cBioPortalTMEM125
AceView (NCBI)TMEM125
Genatlas (Paris)TMEM125
SOURCE (Princeton)TMEM125
Genetics Home Reference (NIH)TMEM125
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM125  -     chr1:43269983-43274002 +  1p34.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM125  -     1p34.2   [Description]    (hg19-Feb_2009)
GoldenPathTMEM125 - 1p34.2 [CytoView hg19]  TMEM125 - 1p34.2 [CytoView hg38]
ImmunoBaseENSG00000179178
Genome Data Viewer NCBITMEM125 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC016858 BC072393 BI768096 BI821566 BM677938
RefSeq transcript (Entrez)NM_001320244 NM_144626
Consensus coding sequences : CCDS (NCBI)TMEM125
Gene ExpressionTMEM125 [ NCBI-GEO ]   TMEM125 [ EBI - ARRAY_EXPRESS ]   TMEM125 [ SEEK ]   TMEM125 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM125 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM125 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)128218
GTEX Portal (Tissue expression)TMEM125
Human Protein AtlasENSG00000179178-TMEM125 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96AQ2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96AQ2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96AQ2
PhosPhoSitePlusQ96AQ2
Domains : Interpro (EBI)TMEM125   
Domain families : Pfam (Sanger)TMEM125 (PF15109)   
Domain families : Pfam (NCBI)pfam15109   
Conserved Domain (NCBI)TMEM125
SuperfamilyQ96AQ2
AlphaFold pdb e-kbQ96AQ2   
Human Protein Atlas [tissue]ENSG00000179178-TMEM125 [tissue]
HPRD14457
Protein Interaction databases
DIP (DOE-UCLA)Q96AQ2
IntAct (EBI)Q96AQ2
BioGRIDTMEM125
STRING (EMBL)TMEM125
ZODIACTMEM125
Ontologies - Pathways
QuickGOQ96AQ2
Ontology : AmiGOmolecular_function  cellular_component  biological_process  integral component of membrane  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  integral component of membrane  
NDEx NetworkTMEM125
Atlas of Cancer Signalling NetworkTMEM125
Wikipedia pathwaysTMEM125
Orthology - Evolution
OrthoDB128218
GeneTree (enSembl)ENSG00000179178
Phylogenetic Trees/Animal Genes : TreeFamTMEM125
Homologs : HomoloGeneTMEM125
Homology/Alignments : Family Browser (UCSC)TMEM125
Gene fusions - Rearrangements
Fusion : QuiverTMEM125
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM125 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM125
dbVarTMEM125
ClinVarTMEM125
MonarchTMEM125
1000_GenomesTMEM125 
Exome Variant ServerTMEM125
GNOMAD BrowserENSG00000179178
Varsome BrowserTMEM125
ACMGTMEM125 variants
VarityQ96AQ2
Genomic Variants (DGV)TMEM125 [DGVbeta]
DECIPHERTMEM125 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM125 
Mutations
ICGC Data PortalTMEM125 
TCGA Data PortalTMEM125 
Broad Tumor PortalTMEM125
OASIS PortalTMEM125 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM125  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM125
Mutations and Diseases : HGMDTMEM125
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM125
DgiDB (Drug Gene Interaction Database)TMEM125
DoCM (Curated mutations)TMEM125
CIViC (Clinical Interpretations of Variants in Cancer)TMEM125
Cancer3DTMEM125
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM125
MedgenTMEM125
Genetic Testing Registry TMEM125
NextProtQ96AQ2 [Medical]
GENETestsTMEM125
Target ValidationTMEM125
Huge Navigator TMEM125 [HugePedia]
ClinGenTMEM125
Clinical trials, drugs, therapy
MyCancerGenomeTMEM125
Protein Interactions : CTDTMEM125
Pharm GKB GenePA143485644
PharosQ96AQ2
Clinical trialTMEM125
Miscellaneous
canSAR (ICR)TMEM125
HarmonizomeTMEM125
DataMed IndexTMEM125
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM125
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:46 CEST 2021

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