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TMEM126A (transmembrane protein 126A)

Identity

Alias_symbol (synonym)DKFZp586C1924
OPA7
Other alias
HGNC (Hugo) TMEM126A
LocusID (NCBI) 84233
Atlas_Id 74787
Location 11q14.1  [Link to chromosome band 11q14]
Location_base_pair Starts at 85358963 and ends at 85367597 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM126A   25382
Cards
Entrez_Gene (NCBI)TMEM126A  84233  transmembrane protein 126A
AliasesOPA7
GeneCards (Weizmann)TMEM126A
Ensembl hg19 (Hinxton)ENSG00000171202 [Gene_View]  chr11:85358963-85367597 [Contig_View]  TMEM126A [Vega]
Ensembl hg38 (Hinxton)ENSG00000171202 [Gene_View]  chr11:85358963-85367597 [Contig_View]  TMEM126A [Vega]
ICGC DataPortalENSG00000171202
TCGA cBioPortalTMEM126A
AceView (NCBI)TMEM126A
Genatlas (Paris)TMEM126A
WikiGenes84233
SOURCE (Princeton)TMEM126A
Genetics Home Reference (NIH)TMEM126A
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM126A  -     chr11:85358963-85367597 +  11q14.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM126A  -     11q14.1   [Description]    (hg38-Dec_2013)
EnsemblTMEM126A - 11q14.1 [CytoView hg19]  TMEM126A - 11q14.1 [CytoView hg38]
Mapping of homologs : NCBITMEM126A [Mapview hg19]  TMEM126A [Mapview hg38]
OMIM612988   612989   
Gene and transcription
Genbank (Entrez)AK312081 AL136941 AM392856 BC007875 BQ943238
RefSeq transcript (Entrez)NM_001244735 NM_032273
RefSeq genomic (Entrez)NC_000011 NC_018922 NG_017157 NT_167190 NW_004929380
Consensus coding sequences : CCDS (NCBI)TMEM126A
Cluster EST : UnigeneHs.533725 [ NCBI ]
CGAP (NCI)Hs.533725
Alternative Splicing GalleryENSG00000171202
Gene ExpressionTMEM126A [ NCBI-GEO ]   TMEM126A [ EBI - ARRAY_EXPRESS ]   TMEM126A [ SEEK ]   TMEM126A [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM126A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84233
GTEX Portal (Tissue expression)TMEM126A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H061   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H061  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H061
Splice isoforms : SwissVarQ9H061
PhosPhoSitePlusQ9H061
Domains : Interpro (EBI)DUF1370_TMEM126   
Domain families : Pfam (Sanger)DUF1370 (PF07114)   
Domain families : Pfam (NCBI)pfam07114   
Conserved Domain (NCBI)TMEM126A
DMDM Disease mutations84233
Blocks (Seattle)TMEM126A
SuperfamilyQ9H061
Human Protein AtlasENSG00000171202
Peptide AtlasQ9H061
HPRD13216
IPIIPI00031064   IPI00979125   IPI00982290   IPI00981158   
Protein Interaction databases
DIP (DOE-UCLA)Q9H061
IntAct (EBI)Q9H061
FunCoupENSG00000171202
BioGRIDTMEM126A
STRING (EMBL)TMEM126A
ZODIACTMEM126A
Ontologies - Pathways
QuickGOQ9H061
Ontology : AmiGOmolecular_function  mitochondrion  mitochondrial inner membrane  integral component of membrane  optic nerve development  
Ontology : EGO-EBImolecular_function  mitochondrion  mitochondrial inner membrane  integral component of membrane  optic nerve development  
NDEx NetworkTMEM126A
Atlas of Cancer Signalling NetworkTMEM126A
Wikipedia pathwaysTMEM126A
Orthology - Evolution
OrthoDB84233
GeneTree (enSembl)ENSG00000171202
Phylogenetic Trees/Animal Genes : TreeFamTMEM126A
HOVERGENQ9H061
HOGENOMQ9H061
Homologs : HomoloGeneTMEM126A
Homology/Alignments : Family Browser (UCSC)TMEM126A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM126A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM126A
dbVarTMEM126A
ClinVarTMEM126A
1000_GenomesTMEM126A 
Exome Variant ServerTMEM126A
ExAC (Exome Aggregation Consortium)TMEM126A (select the gene name)
Genetic variants : HAPMAP84233
Genomic Variants (DGV)TMEM126A [DGVbeta]
DECIPHER (Syndromes)11:85358963-85367597  ENSG00000171202
CONAN: Copy Number AnalysisTMEM126A 
Mutations
ICGC Data PortalTMEM126A 
TCGA Data PortalTMEM126A 
Broad Tumor PortalTMEM126A
OASIS PortalTMEM126A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM126A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM126A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Eye diseases - LOVD
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TMEM126A
DgiDB (Drug Gene Interaction Database)TMEM126A
DoCM (Curated mutations)TMEM126A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM126A (select a term)
intoGenTMEM126A
Cancer3DTMEM126A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612988    612989   
Orphanet19058   
MedgenTMEM126A
Genetic Testing Registry TMEM126A
NextProtQ9H061 [Medical]
TSGene84233
GENETestsTMEM126A
Huge Navigator TMEM126A [HugePedia]
snp3D : Map Gene to Disease84233
BioCentury BCIQTMEM126A
ClinGenTMEM126A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84233
Chemical/Pharm GKB GenePA143485645
Clinical trialTMEM126A
Miscellaneous
canSAR (ICR)TMEM126A (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM126A
EVEXTMEM126A
GoPubMedTMEM126A
iHOPTMEM126A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:48:24 CET 2017

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