Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TMEM127 (transmembrane protein 127)

Identity

Other names-
HGNC (Hugo) TMEM127
LocusID (NCBI) 55654
Location 2q11.2
Location_base_pair Starts at 96915946 and ends at 96931751 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)TMEM127   26038
Cards
Entrez_Gene (NCBI)TMEM127  55654  transmembrane protein 127
GeneCards (Weizmann)TMEM127
Ensembl (Hinxton) [Gene_View]  chr2:96915946-96931751 [Contig_View]  TMEM127 [Vega]
cBioPortalTMEM127
AceView (NCBI)TMEM127
Genatlas (Paris)TMEM127
WikiGenes55654
SOURCE (Princeton)NM_001193304 NM_017849 NM_032218
Genomic and cartography
GoldenPath (UCSC)TMEM127  -  2q11.2   chr2:96915946-96931751 -  2q11.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM127 - 2q11.2 [CytoView]
Mapping of homologs : NCBITMEM127 [Mapview]
OMIM171300   613403   
Gene and transcription
Genbank (Entrez)AK000514 AK025910 AK293276 AL117494 AL117581
RefSeq transcript (Entrez)NM_001193304 NM_017849 NM_032218
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NG_027695 NT_005403 NW_001838810 NW_004929303
Consensus coding sequences : CCDS (NCBI)TMEM127
Cluster EST : UnigeneHs.735706 [ NCBI ]
CGAP (NCI)Hs.735706
Alternative Splicing : Fast-db (Paris)GSHG0017825
Gene ExpressionTMEM127 [ NCBI-GEO ]     TMEM127 [ SEEK ]   TMEM127 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75204 (Uniprot)
NextProtO75204  [Medical]
With graphics : InterProO75204
Splice isoforms : SwissVarO75204 (Swissvar)
Related proteins : CluSTrO75204
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations55654
Blocks (Seattle)O75204
Peptide AtlasO75204
HPRD07917
IPIIPI00016455   IPI00386215   IPI00927741   
Protein Interaction databases
DIP (DOE-UCLA)O75204
IntAct (EBI)O75204
BioGRIDTMEM127
InParanoidO75204
Interologous Interaction database O75204
IntegromeDBTMEM127
STRING (EMBL)TMEM127
Ontologies - Pathways
Ontology : AmiGOmolecular_function  cytoplasm  plasma membrane  negative regulation of cell proliferation  integral component of membrane  negative regulation of TOR signaling  
Ontology : EGO-EBImolecular_function  cytoplasm  plasma membrane  negative regulation of cell proliferation  integral component of membrane  negative regulation of TOR signaling  
Protein Interaction DatabaseTMEM127
Wikipedia pathwaysTMEM127
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)TMEM127
snp3D : Map Gene to Disease55654
SNP (GeneSNP Utah)TMEM127
SNP : HGBaseTMEM127
Genetic variants : HAPMAPTMEM127
Exome VariantTMEM127
1000_GenomesTMEM127 
Somatic Mutations in Cancer : COSMICTMEM127 
CONAN: Copy Number AnalysisTMEM127 
Mutations and Diseases : HGMDTMEM127
Genomic VariantsTMEM127  TMEM127 [DGVbeta]
dbVarTMEM127
ClinVarTMEM127
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM171300    613403   
MedgenTMEM127
GENETestsTMEM127
Disease Genetic AssociationTMEM127
Huge Navigator TMEM127 [HugePedia]  TMEM127 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneTMEM127
Homology/Alignments : Family Browser (UCSC)TMEM127
Phylogenetic Trees/Animal Genes : TreeFamTMEM127
Chemical/Protein Interactions : CTD55654
Chemical/Pharm GKB GenePA143485647
Clinical trialTMEM127
Other databases
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
CoreMineTMEM127
iHOPTMEM127
OncoSearchTMEM127
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Jul 26 14:50:14 CEST 2014
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