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TMEM127 (transmembrane protein 127)

Identity

Alias_symbol (synonym)FLJ20507
FLJ22257
Other alias-
HGNC (Hugo) TMEM127
LocusID (NCBI) 55654
Atlas_Id 51455
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 96250208 and ends at 96266013 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FRY (13q13.1) / TMEM127 (2q11.2)GLG1 (16q23.1) / TMEM127 (2q11.2)TMEM127 (2q11.2) / STAM (10p12.33)
TMEM127 (2q11.2) / UPK1B (3q13.32)TMEM127 2q11.2 / STAM 10p12.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 2 ]

Solid Tumors HeadNeckParagangliomaID6202 TT_t0210q11p12ID104975


Other Cancer prone implicated (Data extracted from papers in the Atlas) [ 1 ]
  Hereditary paraganglioma (PGL)


External links

Nomenclature
HGNC (Hugo)TMEM127   26038
LRG (Locus Reference Genomic)LRG_528
Cards
Entrez_Gene (NCBI)TMEM127  55654  transmembrane protein 127
Aliases
GeneCards (Weizmann)TMEM127
Ensembl hg19 (Hinxton)ENSG00000135956 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135956 [Gene_View]  ENSG00000135956 [Sequence]  chr2:96250208-96266013 [Contig_View]  TMEM127 [Vega]
ICGC DataPortalENSG00000135956
TCGA cBioPortalTMEM127
AceView (NCBI)TMEM127
Genatlas (Paris)TMEM127
WikiGenes55654
SOURCE (Princeton)TMEM127
Genetics Home Reference (NIH)TMEM127
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM127  -     chr2:96250208-96266013 -  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM127  -     2q11.2   [Description]    (hg19-Feb_2009)
GoldenPathTMEM127 - 2q11.2 [CytoView hg19]  TMEM127 - 2q11.2 [CytoView hg38]
ImmunoBaseENSG00000135956
Mapping of homologs : NCBITMEM127 [Mapview hg19]  TMEM127 [Mapview hg38]
OMIM171300   613403   
Gene and transcription
Genbank (Entrez)AK000514 AK025910 AK293276 AL117494 AL117581
RefSeq transcript (Entrez)NM_001193304 NM_017849 NM_032218
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM127
Alternative Splicing GalleryENSG00000135956
Gene ExpressionTMEM127 [ NCBI-GEO ]   TMEM127 [ EBI - ARRAY_EXPRESS ]   TMEM127 [ SEEK ]   TMEM127 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM127 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)55654
GTEX Portal (Tissue expression)TMEM127
Human Protein AtlasENSG00000135956-TMEM127 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM127
DMDM Disease mutations55654
Blocks (Seattle)TMEM127
Human Protein Atlas [tissue]ENSG00000135956-TMEM127 [tissue]
HPRD07917
IPIIPI00016455   IPI00386215   IPI00927741   
Protein Interaction databases
FunCoupENSG00000135956
BioGRIDTMEM127
STRING (EMBL)TMEM127
ZODIACTMEM127
Ontologies - Pathways
Huge Navigator TMEM127 [HugePedia]
snp3D : Map Gene to Disease55654
BioCentury BCIQTMEM127
ClinGenTMEM127
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55654
Chemical/Pharm GKB GenePA143485647
Clinical trialTMEM127
Miscellaneous
canSAR (ICR)TMEM127 (select the gene name)
DataMed IndexTMEM127
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM127
EVEXTMEM127
GoPubMedTMEM127
iHOPTMEM127
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 19 17:13:17 CET 2020

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