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TMEM128 (transmembrane protein 128)

Identity

Alias_symbol (synonym)MGC13159
Other alias-
HGNC (Hugo) TMEM128
LocusID (NCBI) 85013
Atlas_Id 74789
Location 4p16.3  [Link to chromosome band 4p16]
Location_base_pair Starts at 4235542 and ends at 4248242 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM128   28201
Cards
Entrez_Gene (NCBI)TMEM128  85013  transmembrane protein 128
Aliases
GeneCards (Weizmann)TMEM128
Ensembl hg19 (Hinxton)ENSG00000132406 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132406 [Gene_View]  chr4:4235542-4248242 [Contig_View]  TMEM128 [Vega]
ICGC DataPortalENSG00000132406
TCGA cBioPortalTMEM128
AceView (NCBI)TMEM128
Genatlas (Paris)TMEM128
WikiGenes85013
SOURCE (Princeton)TMEM128
Genetics Home Reference (NIH)TMEM128
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM128  -     chr4:4235542-4248242 -  4p16.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM128  -     4p16.3   [Description]    (hg19-Feb_2009)
EnsemblTMEM128 - 4p16.3 [CytoView hg19]  TMEM128 - 4p16.3 [CytoView hg38]
Mapping of homologs : NCBITMEM128 [Mapview hg19]  TMEM128 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001453 AK054701 AK295248 AK296007 BC007729
RefSeq transcript (Entrez)NM_001297551 NM_001297552 NM_032927
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM128
Cluster EST : UnigeneHs.12845 [ NCBI ]
CGAP (NCI)Hs.12845
Alternative Splicing GalleryENSG00000132406
Gene ExpressionTMEM128 [ NCBI-GEO ]   TMEM128 [ EBI - ARRAY_EXPRESS ]   TMEM128 [ SEEK ]   TMEM128 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM128 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85013
GTEX Portal (Tissue expression)TMEM128
Human Protein AtlasENSG00000132406-TMEM128 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5BJH2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5BJH2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5BJH2
Splice isoforms : SwissVarQ5BJH2
PhosPhoSitePlusQ5BJH2
Domains : Interpro (EBI)TMEM128   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM128
DMDM Disease mutations85013
Blocks (Seattle)TMEM128
SuperfamilyQ5BJH2
Human Protein Atlas [tissue]ENSG00000132406-TMEM128 [tissue]
Peptide AtlasQ5BJH2
HPRD17483
IPIIPI00063419   IPI00657669   IPI01010439   
Protein Interaction databases
DIP (DOE-UCLA)Q5BJH2
IntAct (EBI)Q5BJH2
FunCoupENSG00000132406
BioGRIDTMEM128
STRING (EMBL)TMEM128
ZODIACTMEM128
Ontologies - Pathways
QuickGOQ5BJH2
Ontology : AmiGOmolecular_function  protein binding  cellular_component  biological_process  integral component of membrane  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  biological_process  integral component of membrane  
NDEx NetworkTMEM128
Atlas of Cancer Signalling NetworkTMEM128
Wikipedia pathwaysTMEM128
Orthology - Evolution
OrthoDB85013
GeneTree (enSembl)ENSG00000132406
Phylogenetic Trees/Animal Genes : TreeFamTMEM128
HOVERGENQ5BJH2
HOGENOMQ5BJH2
Homologs : HomoloGeneTMEM128
Homology/Alignments : Family Browser (UCSC)TMEM128
Gene fusions - Rearrangements
Tumor Fusion PortalTMEM128
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM128 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM128
dbVarTMEM128
ClinVarTMEM128
1000_GenomesTMEM128 
Exome Variant ServerTMEM128
ExAC (Exome Aggregation Consortium)ENSG00000132406
GNOMAD BrowserENSG00000132406
Genetic variants : HAPMAP85013
Genomic Variants (DGV)TMEM128 [DGVbeta]
DECIPHERTMEM128 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM128 
Mutations
ICGC Data PortalTMEM128 
TCGA Data PortalTMEM128 
Broad Tumor PortalTMEM128
OASIS PortalTMEM128 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM128  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM128
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM128
DgiDB (Drug Gene Interaction Database)TMEM128
DoCM (Curated mutations)TMEM128 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM128 (select a term)
intoGenTMEM128
Cancer3DTMEM128(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM128
MedgenTMEM128
Genetic Testing Registry TMEM128
NextProtQ5BJH2 [Medical]
TSGene85013
GENETestsTMEM128
Target ValidationTMEM128
Huge Navigator TMEM128 [HugePedia]
snp3D : Map Gene to Disease85013
BioCentury BCIQTMEM128
ClinGenTMEM128
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85013
Chemical/Pharm GKB GenePA143485648
Clinical trialTMEM128
Miscellaneous
canSAR (ICR)TMEM128 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM128
EVEXTMEM128
GoPubMedTMEM128
iHOPTMEM128
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:11:04 CET 2017

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