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TMEM130 (transmembrane protein 130)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM130
HGNC Alias symbDKFZp761L1417
FLJ42643
LocusID (NCBI) 222865
Atlas_Id 74791
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 98846490 and ends at 98870014 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LOC440028 (11p15.4) / TMEM130 (7q22.1)TMEM130 (7q22.1) / KPNA7 (7q22.1)ZDHHC8P1 () / TMEM130 (7q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM130   25429
Cards
Entrez_Gene (NCBI)TMEM130    transmembrane protein 130
Aliases
GeneCards (Weizmann)TMEM130
Ensembl hg19 (Hinxton)ENSG00000166448 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166448 [Gene_View]  ENSG00000166448 [Sequence]  chr7:98846490-98870014 [Contig_View]  TMEM130 [Vega]
ICGC DataPortalENSG00000166448
TCGA cBioPortalTMEM130
AceView (NCBI)TMEM130
Genatlas (Paris)TMEM130
SOURCE (Princeton)TMEM130
Genetics Home Reference (NIH)TMEM130
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM130  -     chr7:98846490-98870014 -  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM130  -     7q22.1   [Description]    (hg19-Feb_2009)
GoldenPathTMEM130 - 7q22.1 [CytoView hg19]  TMEM130 - 7q22.1 [CytoView hg38]
ImmunoBaseENSG00000166448
Genome Data Viewer NCBITMEM130 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB072903 AK124634 AK225783 AK294658 AK295543
RefSeq transcript (Entrez)NM_001134450 NM_001134451 NM_152913
Consensus coding sequences : CCDS (NCBI)TMEM130
Gene ExpressionTMEM130 [ NCBI-GEO ]   TMEM130 [ EBI - ARRAY_EXPRESS ]   TMEM130 [ SEEK ]   TMEM130 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM130 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM130 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)222865
GTEX Portal (Tissue expression)TMEM130
Human Protein AtlasENSG00000166448-TMEM130 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N3G9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N3G9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N3G9
PhosPhoSitePlusQ8N3G9
Domaine pattern : Prosite (Expaxy)PKD (PS50093)   
Domains : Interpro (EBI)Ig-like_fold    PKD_dom    PKD_dom_sf   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM130
SuperfamilyQ8N3G9
AlphaFold pdb e-kbQ8N3G9   
Human Protein Atlas [tissue]ENSG00000166448-TMEM130 [tissue]
HPRD13226
Protein Interaction databases
DIP (DOE-UCLA)Q8N3G9
IntAct (EBI)Q8N3G9
BioGRIDTMEM130
STRING (EMBL)TMEM130
ZODIACTMEM130
Ontologies - Pathways
QuickGOQ8N3G9
Ontology : AmiGOGolgi membrane  protein binding  Golgi apparatus  integral component of plasma membrane  
Ontology : EGO-EBIGolgi membrane  protein binding  Golgi apparatus  integral component of plasma membrane  
NDEx NetworkTMEM130
Atlas of Cancer Signalling NetworkTMEM130
Wikipedia pathwaysTMEM130
Orthology - Evolution
OrthoDB222865
GeneTree (enSembl)ENSG00000166448
Phylogenetic Trees/Animal Genes : TreeFamTMEM130
Homologs : HomoloGeneTMEM130
Homology/Alignments : Family Browser (UCSC)TMEM130
Gene fusions - Rearrangements
Fusion : QuiverTMEM130
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM130 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM130
dbVarTMEM130
ClinVarTMEM130
MonarchTMEM130
1000_GenomesTMEM130 
Exome Variant ServerTMEM130
GNOMAD BrowserENSG00000166448
Varsome BrowserTMEM130
ACMGTMEM130 variants
VarityQ8N3G9
Genomic Variants (DGV)TMEM130 [DGVbeta]
DECIPHERTMEM130 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM130 
Mutations
ICGC Data PortalTMEM130 
TCGA Data PortalTMEM130 
Broad Tumor PortalTMEM130
OASIS PortalTMEM130 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM130  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM130
Mutations and Diseases : HGMDTMEM130
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM130
DgiDB (Drug Gene Interaction Database)TMEM130
DoCM (Curated mutations)TMEM130
CIViC (Clinical Interpretations of Variants in Cancer)TMEM130
Cancer3DTMEM130
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM130
MedgenTMEM130
Genetic Testing Registry TMEM130
NextProtQ8N3G9 [Medical]
GENETestsTMEM130
Target ValidationTMEM130
Huge Navigator TMEM130 [HugePedia]
ClinGenTMEM130
Clinical trials, drugs, therapy
MyCancerGenomeTMEM130
Protein Interactions : CTDTMEM130
Pharm GKB GenePA143485650
PharosQ8N3G9
Clinical trialTMEM130
Miscellaneous
canSAR (ICR)TMEM130
HarmonizomeTMEM130
DataMed IndexTMEM130
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM130
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:47 CEST 2021

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