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TMEM131 (transmembrane protein 131)

Identity

Alias_symbol (synonym)CC28
YR-23
RW1
KIAA0257
PRO1048
Other alias
HGNC (Hugo) TMEM131
LocusID (NCBI) 23505
Atlas_Id 74792
Location 2q11.2  [Link to chromosome band 2q11]
Location_base_pair Starts at 97756338 and ends at 97995891 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANKRD44 (2q33.1) / TMEM131 (2q11.2)ERAL1 (17q11.2) / TMEM131 (2q11.2)FATE1 (Xq28) / TMEM131 (2q11.2)
TMBIM4 (12q14.3) / TMEM131 (2q11.2)TMEM131 (2q11.2) / SPATA16 (3q26.31)TMEM131 (2q11.2) / TGFBRAP1 (2q12.1)
TMEM131 (2q11.2) / TMEM131 (2q11.2)ZNF106 (15q15.1) / TMEM131 (2q11.2)TMEM131 TGFBRAP1
TMEM131 SPATA16

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM131   30366
Cards
Entrez_Gene (NCBI)TMEM131  23505  transmembrane protein 131
AliasesCC28; PRO1048; RW1; YR-23
GeneCards (Weizmann)TMEM131
Ensembl hg19 (Hinxton)ENSG00000075568 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000075568 [Gene_View]  chr2:97756338-97995891 [Contig_View]  TMEM131 [Vega]
ICGC DataPortalENSG00000075568
TCGA cBioPortalTMEM131
AceView (NCBI)TMEM131
Genatlas (Paris)TMEM131
WikiGenes23505
SOURCE (Princeton)TMEM131
Genetics Home Reference (NIH)TMEM131
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM131  -     chr2:97756338-97995891 -  2q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM131  -     2q11.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM131 - 2q11.2 [CytoView hg19]  TMEM131 - 2q11.2 [CytoView hg38]
Mapping of homologs : NCBITMEM131 [Mapview hg19]  TMEM131 [Mapview hg38]
OMIM615659   
Gene and transcription
Genbank (Entrez)AK025852 AK098792 AK297450 AU132630 BC018018
RefSeq transcript (Entrez)NM_015348
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM131
Cluster EST : UnigeneHs.469376 [ NCBI ]
CGAP (NCI)Hs.469376
Alternative Splicing GalleryENSG00000075568
Gene ExpressionTMEM131 [ NCBI-GEO ]   TMEM131 [ EBI - ARRAY_EXPRESS ]   TMEM131 [ SEEK ]   TMEM131 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM131 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23505
GTEX Portal (Tissue expression)TMEM131
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ92545   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ92545  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ92545
Splice isoforms : SwissVarQ92545
PhosPhoSitePlusQ92545
Domains : Interpro (EBI)PapD-like    TMEM131-like   
Domain families : Pfam (Sanger)TMEM131_like (PF12371)   
Domain families : Pfam (NCBI)pfam12371   
Conserved Domain (NCBI)TMEM131
DMDM Disease mutations23505
Blocks (Seattle)TMEM131
SuperfamilyQ92545
Human Protein AtlasENSG00000075568
Peptide AtlasQ92545
IPIIPI00853149   IPI00916157   IPI00020555   IPI00916283   IPI00973145   
Protein Interaction databases
DIP (DOE-UCLA)Q92545
IntAct (EBI)Q92545
FunCoupENSG00000075568
BioGRIDTMEM131
STRING (EMBL)TMEM131
ZODIACTMEM131
Ontologies - Pathways
QuickGOQ92545
Ontology : AmiGOmolecular_function  cellular_component  biological_process  membrane  integral component of membrane  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  membrane  integral component of membrane  
NDEx NetworkTMEM131
Atlas of Cancer Signalling NetworkTMEM131
Wikipedia pathwaysTMEM131
Orthology - Evolution
OrthoDB23505
GeneTree (enSembl)ENSG00000075568
Phylogenetic Trees/Animal Genes : TreeFamTMEM131
HOVERGENQ92545
HOGENOMQ92545
Homologs : HomoloGeneTMEM131
Homology/Alignments : Family Browser (UCSC)TMEM131
Gene fusions - Rearrangements
Fusion: TCGATMEM131 TGFBRAP1
Fusion: TCGATMEM131 SPATA16
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM131 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM131
dbVarTMEM131
ClinVarTMEM131
1000_GenomesTMEM131 
Exome Variant ServerTMEM131
ExAC (Exome Aggregation Consortium)TMEM131 (select the gene name)
Genetic variants : HAPMAP23505
Genomic Variants (DGV)TMEM131 [DGVbeta]
DECIPHERTMEM131 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM131 
Mutations
ICGC Data PortalTMEM131 
TCGA Data PortalTMEM131 
Broad Tumor PortalTMEM131
OASIS PortalTMEM131 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM131  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM131
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM131
DgiDB (Drug Gene Interaction Database)TMEM131
DoCM (Curated mutations)TMEM131 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM131 (select a term)
intoGenTMEM131
Cancer3DTMEM131(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615659   
Orphanet
MedgenTMEM131
Genetic Testing Registry TMEM131
NextProtQ92545 [Medical]
TSGene23505
GENETestsTMEM131
Target ValidationTMEM131
Huge Navigator TMEM131 [HugePedia]
snp3D : Map Gene to Disease23505
BioCentury BCIQTMEM131
ClinGenTMEM131
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23505
Chemical/Pharm GKB GenePA143485651
Clinical trialTMEM131
Miscellaneous
canSAR (ICR)TMEM131 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM131
EVEXTMEM131
GoPubMedTMEM131
iHOPTMEM131
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:45:50 CEST 2017

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