Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TMEM132C (transmembrane protein 132C)

Identity

Alias_symbol (synonym)DKFZp761O2018
PPP1R152
Other alias
HGNC (Hugo) TMEM132C
LocusID (NCBI) 92293
Atlas_Id 74794
Location 12q24.32  [Link to chromosome band 12q24]
Location_base_pair Starts at 128267403 and ends at 128707915 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM132C (12q24.32) / CDH1 (16q22.1)TRERF1 (6p21.1) / TMEM132C (12q24.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(6;12)(p21;q24) TRERF1/TMEM132C

External links

Nomenclature
HGNC (Hugo)TMEM132C   25436
Cards
Entrez_Gene (NCBI)TMEM132C  92293  transmembrane protein 132C
AliasesPPP1R152
GeneCards (Weizmann)TMEM132C
Ensembl hg19 (Hinxton)ENSG00000181234 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181234 [Gene_View]  ENSG00000181234 [Sequence]  chr12:128267403-128707915 [Contig_View]  TMEM132C [Vega]
ICGC DataPortalENSG00000181234
TCGA cBioPortalTMEM132C
AceView (NCBI)TMEM132C
Genatlas (Paris)TMEM132C
WikiGenes92293
SOURCE (Princeton)TMEM132C
Genetics Home Reference (NIH)TMEM132C
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM132C  -     chr12:128267403-128707915 +  12q24.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM132C  -     12q24.32   [Description]    (hg19-Feb_2009)
EnsemblTMEM132C - 12q24.32 [CytoView hg19]  TMEM132C - 12q24.32 [CytoView hg38]
Mapping of homologs : NCBITMEM132C [Mapview hg19]  TMEM132C [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126715 AL122107 AL831921 AL832160
RefSeq transcript (Entrez)NM_001136103
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM132C
Cluster EST : UnigeneHs.49599 [ NCBI ]
CGAP (NCI)Hs.49599
Alternative Splicing GalleryENSG00000181234
Gene ExpressionTMEM132C [ NCBI-GEO ]   TMEM132C [ EBI - ARRAY_EXPRESS ]   TMEM132C [ SEEK ]   TMEM132C [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM132C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)92293
GTEX Portal (Tissue expression)TMEM132C
Human Protein AtlasENSG00000181234-TMEM132C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N3T6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N3T6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N3T6
Splice isoforms : SwissVarQ8N3T6
PhosPhoSitePlusQ8N3T6
Domains : Interpro (EBI)TMEM132    TMEM132_C    TMEM132_M    TMEM132_N   
Domain families : Pfam (Sanger)TMEM132 (PF16070)    TMEM132D_C (PF15706)    TMEM132D_N (PF15705)   
Domain families : Pfam (NCBI)pfam16070    pfam15706    pfam15705   
Conserved Domain (NCBI)TMEM132C
DMDM Disease mutations92293
Blocks (Seattle)TMEM132C
SuperfamilyQ8N3T6
Human Protein Atlas [tissue]ENSG00000181234-TMEM132C [tissue]
Peptide AtlasQ8N3T6
IPIIPI00166622   IPI01012464   
Protein Interaction databases
DIP (DOE-UCLA)Q8N3T6
IntAct (EBI)Q8N3T6
FunCoupENSG00000181234
BioGRIDTMEM132C
STRING (EMBL)TMEM132C
ZODIACTMEM132C
Ontologies - Pathways
QuickGOQ8N3T6
Ontology : AmiGOmolecular_function  cellular_component  biological_process  integral component of membrane  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  integral component of membrane  
NDEx NetworkTMEM132C
Atlas of Cancer Signalling NetworkTMEM132C
Wikipedia pathwaysTMEM132C
Orthology - Evolution
OrthoDB92293
GeneTree (enSembl)ENSG00000181234
Phylogenetic Trees/Animal Genes : TreeFamTMEM132C
HOVERGENQ8N3T6
HOGENOMQ8N3T6
Homologs : HomoloGeneTMEM132C
Homology/Alignments : Family Browser (UCSC)TMEM132C
Gene fusions - Rearrangements
Fusion : QuiverTMEM132C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM132C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM132C
dbVarTMEM132C
ClinVarTMEM132C
1000_GenomesTMEM132C 
Exome Variant ServerTMEM132C
ExAC (Exome Aggregation Consortium)ENSG00000181234
GNOMAD BrowserENSG00000181234
Varsome BrowserTMEM132C
Genetic variants : HAPMAP92293
Genomic Variants (DGV)TMEM132C [DGVbeta]
DECIPHERTMEM132C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM132C 
Mutations
ICGC Data PortalTMEM132C 
TCGA Data PortalTMEM132C 
Broad Tumor PortalTMEM132C
OASIS PortalTMEM132C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM132C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM132C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM132C
DgiDB (Drug Gene Interaction Database)TMEM132C
DoCM (Curated mutations)TMEM132C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM132C (select a term)
intoGenTMEM132C
Cancer3DTMEM132C(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM132C
MedgenTMEM132C
Genetic Testing Registry TMEM132C
NextProtQ8N3T6 [Medical]
TSGene92293
GENETestsTMEM132C
Target ValidationTMEM132C
Huge Navigator TMEM132C [HugePedia]
snp3D : Map Gene to Disease92293
BioCentury BCIQTMEM132C
ClinGenTMEM132C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD92293
Chemical/Pharm GKB GenePA143485653
Clinical trialTMEM132C
Miscellaneous
canSAR (ICR)TMEM132C (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM132C
EVEXTMEM132C
GoPubMedTMEM132C
iHOPTMEM132C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Jul 30 14:35:12 CEST 2018
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