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TMEM132E (transmembrane protein 132E)

Identity

Alias_symbol (synonym)DFNB99
Other alias
HGNC (Hugo) TMEM132E
LocusID (NCBI) 124842
Atlas_Id 74796
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 34580749 and ends at 34639318 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PIP4K2B (17q12) / TMEM132E (17q12)TMEM132E (17q12) / GPATCH8 (17q21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM132E   26991
Cards
Entrez_Gene (NCBI)TMEM132E  124842  transmembrane protein 132E
AliasesDFNB99
GeneCards (Weizmann)TMEM132E
Ensembl hg19 (Hinxton)ENSG00000181291 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181291 [Gene_View]  chr17:34580749-34639318 [Contig_View]  TMEM132E [Vega]
ICGC DataPortalENSG00000181291
TCGA cBioPortalTMEM132E
AceView (NCBI)TMEM132E
Genatlas (Paris)TMEM132E
WikiGenes124842
SOURCE (Princeton)TMEM132E
Genetics Home Reference (NIH)TMEM132E
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM132E  -     chr17:34580749-34639318 +  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM132E  -     17q12   [Description]    (hg19-Feb_2009)
EnsemblTMEM132E - 17q12 [CytoView hg19]  TMEM132E - 17q12 [CytoView hg38]
Mapping of homologs : NCBITMEM132E [Mapview hg19]  TMEM132E [Mapview hg38]
OMIM616178   
Gene and transcription
Genbank (Entrez)BC018318 BC020591 BN000149 N34927
RefSeq transcript (Entrez)NM_001304438 NM_207313
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM132E
Cluster EST : UnigeneHs.310482 [ NCBI ]
CGAP (NCI)Hs.310482
Alternative Splicing GalleryENSG00000181291
Gene ExpressionTMEM132E [ NCBI-GEO ]   TMEM132E [ EBI - ARRAY_EXPRESS ]   TMEM132E [ SEEK ]   TMEM132E [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM132E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)124842
GTEX Portal (Tissue expression)TMEM132E
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IEE7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IEE7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IEE7
Splice isoforms : SwissVarQ6IEE7
PhosPhoSitePlusQ6IEE7
Domains : Interpro (EBI)TMEM132    TMEM132_C    TMEM132_M    TMEM132_N   
Domain families : Pfam (Sanger)TMEM132 (PF16070)    TMEM132D_C (PF15706)    TMEM132D_N (PF15705)   
Domain families : Pfam (NCBI)pfam16070    pfam15706    pfam15705   
Conserved Domain (NCBI)TMEM132E
DMDM Disease mutations124842
Blocks (Seattle)TMEM132E
SuperfamilyQ6IEE7
Human Protein AtlasENSG00000181291
Peptide AtlasQ6IEE7
HPRD14030
IPIIPI00413912   
Protein Interaction databases
DIP (DOE-UCLA)Q6IEE7
IntAct (EBI)Q6IEE7
FunCoupENSG00000181291
BioGRIDTMEM132E
STRING (EMBL)TMEM132E
ZODIACTMEM132E
Ontologies - Pathways
QuickGOQ6IEE7
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM132E
Atlas of Cancer Signalling NetworkTMEM132E
Wikipedia pathwaysTMEM132E
Orthology - Evolution
OrthoDB124842
GeneTree (enSembl)ENSG00000181291
Phylogenetic Trees/Animal Genes : TreeFamTMEM132E
HOVERGENQ6IEE7
HOGENOMQ6IEE7
Homologs : HomoloGeneTMEM132E
Homology/Alignments : Family Browser (UCSC)TMEM132E
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM132E [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM132E
dbVarTMEM132E
ClinVarTMEM132E
1000_GenomesTMEM132E 
Exome Variant ServerTMEM132E
ExAC (Exome Aggregation Consortium)TMEM132E (select the gene name)
Genetic variants : HAPMAP124842
Genomic Variants (DGV)TMEM132E [DGVbeta]
DECIPHERTMEM132E [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM132E 
Mutations
ICGC Data PortalTMEM132E 
TCGA Data PortalTMEM132E 
Broad Tumor PortalTMEM132E
OASIS PortalTMEM132E [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM132E  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM132E
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM132E
DgiDB (Drug Gene Interaction Database)TMEM132E
DoCM (Curated mutations)TMEM132E (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM132E (select a term)
intoGenTMEM132E
Cancer3DTMEM132E(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616178   
Orphanet
MedgenTMEM132E
Genetic Testing Registry TMEM132E
NextProtQ6IEE7 [Medical]
TSGene124842
GENETestsTMEM132E
Target ValidationTMEM132E
Huge Navigator TMEM132E [HugePedia]
snp3D : Map Gene to Disease124842
BioCentury BCIQTMEM132E
ClinGenTMEM132E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD124842
Chemical/Pharm GKB GenePA143485655
Clinical trialTMEM132E
Miscellaneous
canSAR (ICR)TMEM132E (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM132E
EVEXTMEM132E
GoPubMedTMEM132E
iHOPTMEM132E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:45:51 CEST 2017

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