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TMEM140 (transmembrane protein 140)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM140
HGNC Alias symbFLJ11000
LocusID (NCBI) 55281
Atlas_Id 74803
Location 7q33  [Link to chromosome band 7q33]
Location_base_pair Starts at 135148072 and ends at 135166215 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM140   21870
Cards
Entrez_Gene (NCBI)TMEM140    transmembrane protein 140
Aliases
GeneCards (Weizmann)TMEM140
Ensembl hg19 (Hinxton)ENSG00000146859 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146859 [Gene_View]  ENSG00000146859 [Sequence]  chr7:135148072-135166215 [Contig_View]  TMEM140 [Vega]
ICGC DataPortalENSG00000146859
TCGA cBioPortalTMEM140
AceView (NCBI)TMEM140
Genatlas (Paris)TMEM140
SOURCE (Princeton)TMEM140
Genetics Home Reference (NIH)TMEM140
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM140  -     chr7:135148072-135166215 +  7q33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM140  -     7q33   [Description]    (hg19-Feb_2009)
GoldenPathTMEM140 - 7q33 [CytoView hg19]  TMEM140 - 7q33 [CytoView hg38]
ImmunoBaseENSG00000146859
Genome Data Viewer NCBITMEM140 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK001862 AK225055 AK301268 BC020942 BM512090
RefSeq transcript (Entrez)NM_018295
Consensus coding sequences : CCDS (NCBI)TMEM140
Gene ExpressionTMEM140 [ NCBI-GEO ]   TMEM140 [ EBI - ARRAY_EXPRESS ]   TMEM140 [ SEEK ]   TMEM140 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM140 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM140 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55281
GTEX Portal (Tissue expression)TMEM140
Human Protein AtlasENSG00000146859-TMEM140 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NV12   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NV12  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NV12
PhosPhoSitePlusQ9NV12
Domains : Interpro (EBI)TM140   
Domain families : Pfam (Sanger)TM140 (PF14985)   
Domain families : Pfam (NCBI)pfam14985   
Conserved Domain (NCBI)TMEM140
SuperfamilyQ9NV12
AlphaFold pdb e-kbQ9NV12   
Human Protein Atlas [tissue]ENSG00000146859-TMEM140 [tissue]
HPRD07723
Protein Interaction databases
DIP (DOE-UCLA)Q9NV12
IntAct (EBI)Q9NV12
BioGRIDTMEM140
STRING (EMBL)TMEM140
ZODIACTMEM140
Ontologies - Pathways
QuickGOQ9NV12
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkTMEM140
Atlas of Cancer Signalling NetworkTMEM140
Wikipedia pathwaysTMEM140
Orthology - Evolution
OrthoDB55281
GeneTree (enSembl)ENSG00000146859
Phylogenetic Trees/Animal Genes : TreeFamTMEM140
Homologs : HomoloGeneTMEM140
Homology/Alignments : Family Browser (UCSC)TMEM140
Gene fusions - Rearrangements
Fusion : QuiverTMEM140
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM140 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM140
dbVarTMEM140
ClinVarTMEM140
MonarchTMEM140
1000_GenomesTMEM140 
Exome Variant ServerTMEM140
GNOMAD BrowserENSG00000146859
Varsome BrowserTMEM140
ACMGTMEM140 variants
VarityQ9NV12
Genomic Variants (DGV)TMEM140 [DGVbeta]
DECIPHERTMEM140 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM140 
Mutations
ICGC Data PortalTMEM140 
TCGA Data PortalTMEM140 
Broad Tumor PortalTMEM140
OASIS PortalTMEM140 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM140  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM140
Mutations and Diseases : HGMDTMEM140
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM140
DgiDB (Drug Gene Interaction Database)TMEM140
DoCM (Curated mutations)TMEM140
CIViC (Clinical Interpretations of Variants in Cancer)TMEM140
Cancer3DTMEM140
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM140
MedgenTMEM140
Genetic Testing Registry TMEM140
NextProtQ9NV12 [Medical]
GENETestsTMEM140
Target ValidationTMEM140
Huge Navigator TMEM140 [HugePedia]
ClinGenTMEM140
Clinical trials, drugs, therapy
MyCancerGenomeTMEM140
Protein Interactions : CTDTMEM140
Pharm GKB GenePA144596261
PharosQ9NV12
Clinical trialTMEM140
Miscellaneous
canSAR (ICR)TMEM140
HarmonizomeTMEM140
DataMed IndexTMEM140
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM140
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:25:49 CEST 2021

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