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TMEM141 (transmembrane protein 141)

Identity

Alias_symbol (synonym)MGC14141
Other alias-
HGNC (Hugo) TMEM141
LocusID (NCBI) 85014
Atlas_Id 74804
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 136791325 and ends at 136793317 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RABL6 (9q34.3) / TMEM141 (9q34.3)TMEM141 (9q34.3) / CCDC183 (9q34.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM141   28211
Cards
Entrez_Gene (NCBI)TMEM141  85014  transmembrane protein 141
Aliases
GeneCards (Weizmann)TMEM141
Ensembl hg19 (Hinxton)ENSG00000244187 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244187 [Gene_View]  chr9:136791325-136793317 [Contig_View]  TMEM141 [Vega]
ICGC DataPortalENSG00000244187
TCGA cBioPortalTMEM141
AceView (NCBI)TMEM141
Genatlas (Paris)TMEM141
WikiGenes85014
SOURCE (Princeton)TMEM141
Genetics Home Reference (NIH)TMEM141
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM141  -     chr9:136791325-136793317 +  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM141  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblTMEM141 - 9q34.3 [CytoView hg19]  TMEM141 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBITMEM141 [Mapview hg19]  TMEM141 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC007834 BU740670 CB107060 HQ447895
RefSeq transcript (Entrez)NM_032928
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM141
Cluster EST : UnigeneHs.356744 [ NCBI ]
CGAP (NCI)Hs.356744
Alternative Splicing GalleryENSG00000244187
Gene ExpressionTMEM141 [ NCBI-GEO ]   TMEM141 [ EBI - ARRAY_EXPRESS ]   TMEM141 [ SEEK ]   TMEM141 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM141 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85014
GTEX Portal (Tissue expression)TMEM141
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96I45   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96I45  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96I45
Splice isoforms : SwissVarQ96I45
PhosPhoSitePlusQ96I45
Domains : Interpro (EBI)Tmem141   
Domain families : Pfam (Sanger)TMEM141 (PF15110)   
Domain families : Pfam (NCBI)pfam15110   
Conserved Domain (NCBI)TMEM141
DMDM Disease mutations85014
Blocks (Seattle)TMEM141
PDB (SRS)2LOR   
PDB (PDBSum)2LOR   
PDB (IMB)2LOR   
PDB (RSDB)2LOR   
Structural Biology KnowledgeBase2LOR   
SCOP (Structural Classification of Proteins)2LOR   
CATH (Classification of proteins structures)2LOR   
SuperfamilyQ96I45
Human Protein AtlasENSG00000244187
Peptide AtlasQ96I45
HPRD17490
IPIIPI00063300   
Protein Interaction databases
DIP (DOE-UCLA)Q96I45
IntAct (EBI)Q96I45
FunCoupENSG00000244187
BioGRIDTMEM141
STRING (EMBL)TMEM141
ZODIACTMEM141
Ontologies - Pathways
QuickGOQ96I45
Ontology : AmiGOcilium movement  axoneme  integral component of membrane  outer dynein arm assembly  
Ontology : EGO-EBIcilium movement  axoneme  integral component of membrane  outer dynein arm assembly  
NDEx NetworkTMEM141
Atlas of Cancer Signalling NetworkTMEM141
Wikipedia pathwaysTMEM141
Orthology - Evolution
OrthoDB85014
GeneTree (enSembl)ENSG00000244187
Phylogenetic Trees/Animal Genes : TreeFamTMEM141
HOVERGENQ96I45
HOGENOMQ96I45
Homologs : HomoloGeneTMEM141
Homology/Alignments : Family Browser (UCSC)TMEM141
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM141 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM141
dbVarTMEM141
ClinVarTMEM141
1000_GenomesTMEM141 
Exome Variant ServerTMEM141
ExAC (Exome Aggregation Consortium)TMEM141 (select the gene name)
Genetic variants : HAPMAP85014
Genomic Variants (DGV)TMEM141 [DGVbeta]
DECIPHERTMEM141 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM141 
Mutations
ICGC Data PortalTMEM141 
TCGA Data PortalTMEM141 
Broad Tumor PortalTMEM141
OASIS PortalTMEM141 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM141  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM141
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM141
DgiDB (Drug Gene Interaction Database)TMEM141
DoCM (Curated mutations)TMEM141 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM141 (select a term)
intoGenTMEM141
Cancer3DTMEM141(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM141
Genetic Testing Registry TMEM141
NextProtQ96I45 [Medical]
TSGene85014
GENETestsTMEM141
Target ValidationTMEM141
Huge Navigator TMEM141 [HugePedia]
snp3D : Map Gene to Disease85014
BioCentury BCIQTMEM141
ClinGenTMEM141
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85014
Chemical/Pharm GKB GenePA144596262
Clinical trialTMEM141
Miscellaneous
canSAR (ICR)TMEM141 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM141
EVEXTMEM141
GoPubMedTMEM141
iHOPTMEM141
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:41 CEST 2017

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