Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMEM141 (transmembrane protein 141)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM141
HGNC Alias symbMGC14141
LocusID (NCBI) 85014
Atlas_Id 74804
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 136791344 and ends at 136793317 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
RABL6 (9q34.3) / TMEM141 (9q34.3)TMEM141 (9q34.3) / CCDC183 (9q34.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM141   28211
Cards
Entrez_Gene (NCBI)TMEM141    transmembrane protein 141
Aliases
GeneCards (Weizmann)TMEM141
Ensembl hg19 (Hinxton)ENSG00000244187 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000244187 [Gene_View]  ENSG00000244187 [Sequence]  chr9:136791344-136793317 [Contig_View]  TMEM141 [Vega]
ICGC DataPortalENSG00000244187
TCGA cBioPortalTMEM141
AceView (NCBI)TMEM141
Genatlas (Paris)TMEM141
SOURCE (Princeton)TMEM141
Genetics Home Reference (NIH)TMEM141
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM141  -     chr9:136791344-136793317 +  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM141  -     9q34.3   [Description]    (hg19-Feb_2009)
GoldenPathTMEM141 - 9q34.3 [CytoView hg19]  TMEM141 - 9q34.3 [CytoView hg38]
ImmunoBaseENSG00000244187
Genome Data Viewer NCBITMEM141 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC007834 BU740670 CB107060
RefSeq transcript (Entrez)NM_032928
Consensus coding sequences : CCDS (NCBI)TMEM141
Gene ExpressionTMEM141 [ NCBI-GEO ]   TMEM141 [ EBI - ARRAY_EXPRESS ]   TMEM141 [ SEEK ]   TMEM141 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM141 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM141 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85014
GTEX Portal (Tissue expression)TMEM141
Human Protein AtlasENSG00000244187-TMEM141 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96I45   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96I45  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96I45
PhosPhoSitePlusQ96I45
Domains : Interpro (EBI)Tmem141    Tmem141_sf   
Domain families : Pfam (Sanger)TMEM141 (PF15110)   
Domain families : Pfam (NCBI)pfam15110   
Conserved Domain (NCBI)TMEM141
PDB (RSDB)2LOR   
PDB Europe2LOR   
PDB (PDBSum)2LOR   
PDB (IMB)2LOR   
Structural Biology KnowledgeBase2LOR   
SCOP (Structural Classification of Proteins)2LOR   
CATH (Classification of proteins structures)2LOR   
SuperfamilyQ96I45
AlphaFold pdb e-kbQ96I45   
Human Protein Atlas [tissue]ENSG00000244187-TMEM141 [tissue]
HPRD17490
Protein Interaction databases
DIP (DOE-UCLA)Q96I45
IntAct (EBI)Q96I45
BioGRIDTMEM141
STRING (EMBL)TMEM141
ZODIACTMEM141
Ontologies - Pathways
QuickGOQ96I45
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkTMEM141
Atlas of Cancer Signalling NetworkTMEM141
Wikipedia pathwaysTMEM141
Orthology - Evolution
OrthoDB85014
GeneTree (enSembl)ENSG00000244187
Phylogenetic Trees/Animal Genes : TreeFamTMEM141
Homologs : HomoloGeneTMEM141
Homology/Alignments : Family Browser (UCSC)TMEM141
Gene fusions - Rearrangements
Fusion : QuiverTMEM141
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM141 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM141
dbVarTMEM141
ClinVarTMEM141
MonarchTMEM141
1000_GenomesTMEM141 
Exome Variant ServerTMEM141
GNOMAD BrowserENSG00000244187
Varsome BrowserTMEM141
ACMGTMEM141 variants
VarityQ96I45
Genomic Variants (DGV)TMEM141 [DGVbeta]
DECIPHERTMEM141 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM141 
Mutations
ICGC Data PortalTMEM141 
TCGA Data PortalTMEM141 
Broad Tumor PortalTMEM141
OASIS PortalTMEM141 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM141  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM141
Mutations and Diseases : HGMDTMEM141
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM141
DgiDB (Drug Gene Interaction Database)TMEM141
DoCM (Curated mutations)TMEM141
CIViC (Clinical Interpretations of Variants in Cancer)TMEM141
Cancer3DTMEM141
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM141
MedgenTMEM141
Genetic Testing Registry TMEM141
NextProtQ96I45 [Medical]
GENETestsTMEM141
Target ValidationTMEM141
Huge Navigator TMEM141 [HugePedia]
ClinGenTMEM141
Clinical trials, drugs, therapy
MyCancerGenomeTMEM141
Protein Interactions : CTDTMEM141
Pharm GKB GenePA144596262
PharosQ96I45
Clinical trialTMEM141
Miscellaneous
canSAR (ICR)TMEM141
HarmonizomeTMEM141
DataMed IndexTMEM141
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM141
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:25:49 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.