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TMEM144 (transmembrane protein 144)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM144
HGNC Alias symbFLJ11155
LocusID (NCBI) 55314
Atlas_Id 54709
Location 4q32.1  [Link to chromosome band 4q32]
Location_base_pair Starts at 158210486 and ends at 158255413 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FAM198B (4q32.1) / TMEM144 (4q32.1)SOX2-OT (3q26.33) / TMEM144 (4q32.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  inv(4)(q32q32) FAM198B/TMEM144


External links

 

Nomenclature
HGNC (Hugo)TMEM144   25633
Cards
Entrez_Gene (NCBI)TMEM144    transmembrane protein 144
Aliases
GeneCards (Weizmann)TMEM144
Ensembl hg19 (Hinxton)ENSG00000164124 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164124 [Gene_View]  ENSG00000164124 [Sequence]  chr4:158210486-158255413 [Contig_View]  TMEM144 [Vega]
ICGC DataPortalENSG00000164124
TCGA cBioPortalTMEM144
AceView (NCBI)TMEM144
Genatlas (Paris)TMEM144
SOURCE (Princeton)TMEM144
Genetics Home Reference (NIH)TMEM144
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM144  -     chr4:158210486-158255413 +  4q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM144  -     4q32.1   [Description]    (hg19-Feb_2009)
GoldenPathTMEM144 - 4q32.1 [CytoView hg19]  TMEM144 - 4q32.1 [CytoView hg38]
ImmunoBaseENSG00000164124
Genome Data Viewer NCBITMEM144 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK002017 BC026318 BC035811 BC036551 BC048117
RefSeq transcript (Entrez)NM_018342
Consensus coding sequences : CCDS (NCBI)TMEM144
Gene ExpressionTMEM144 [ NCBI-GEO ]   TMEM144 [ EBI - ARRAY_EXPRESS ]   TMEM144 [ SEEK ]   TMEM144 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM144 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM144 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55314
GTEX Portal (Tissue expression)TMEM144
Human Protein AtlasENSG00000164124-TMEM144 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z5S9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z5S9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z5S9
PhosPhoSitePlusQ7Z5S9
Domains : Interpro (EBI)Sugar_transport    TMEM144   
Domain families : Pfam (Sanger)TMEM144 (PF07857)   
Domain families : Pfam (NCBI)pfam07857   
Conserved Domain (NCBI)TMEM144
SuperfamilyQ7Z5S9
AlphaFold pdb e-kbQ7Z5S9   
Human Protein Atlas [tissue]ENSG00000164124-TMEM144 [tissue]
HPRD07736
Protein Interaction databases
DIP (DOE-UCLA)Q7Z5S9
IntAct (EBI)Q7Z5S9
BioGRIDTMEM144
STRING (EMBL)TMEM144
ZODIACTMEM144
Ontologies - Pathways
QuickGOQ7Z5S9
Ontology : AmiGOprotein binding  carbohydrate transmembrane transporter activity  integral component of membrane  carbohydrate transmembrane transport  
Ontology : EGO-EBIprotein binding  carbohydrate transmembrane transporter activity  integral component of membrane  carbohydrate transmembrane transport  
NDEx NetworkTMEM144
Atlas of Cancer Signalling NetworkTMEM144
Wikipedia pathwaysTMEM144
Orthology - Evolution
OrthoDB55314
GeneTree (enSembl)ENSG00000164124
Phylogenetic Trees/Animal Genes : TreeFamTMEM144
Homologs : HomoloGeneTMEM144
Homology/Alignments : Family Browser (UCSC)TMEM144
Gene fusions - Rearrangements
Fusion : MitelmanFAM198B/TMEM144 [4q32.1/4q32.1]  
Fusion : QuiverTMEM144
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM144 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM144
dbVarTMEM144
ClinVarTMEM144
MonarchTMEM144
1000_GenomesTMEM144 
Exome Variant ServerTMEM144
GNOMAD BrowserENSG00000164124
Varsome BrowserTMEM144
ACMGTMEM144 variants
VarityQ7Z5S9
Genomic Variants (DGV)TMEM144 [DGVbeta]
DECIPHERTMEM144 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM144 
Mutations
ICGC Data PortalTMEM144 
TCGA Data PortalTMEM144 
Broad Tumor PortalTMEM144
OASIS PortalTMEM144 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM144  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM144
Mutations and Diseases : HGMDTMEM144
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM144
DgiDB (Drug Gene Interaction Database)TMEM144
DoCM (Curated mutations)TMEM144
CIViC (Clinical Interpretations of Variants in Cancer)TMEM144
Cancer3DTMEM144
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM144
MedgenTMEM144
Genetic Testing Registry TMEM144
NextProtQ7Z5S9 [Medical]
GENETestsTMEM144
Target ValidationTMEM144
Huge Navigator TMEM144 [HugePedia]
ClinGenTMEM144
Clinical trials, drugs, therapy
MyCancerGenomeTMEM144
Protein Interactions : CTDTMEM144
Pharm GKB GenePA144596252
PharosQ7Z5S9
Clinical trialTMEM144
Miscellaneous
canSAR (ICR)TMEM144
HarmonizomeTMEM144
DataMed IndexTMEM144
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM144
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:35:25 CEST 2021

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