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TMEM145 (transmembrane protein 145)

Identity

Alias_symbol (synonym)FLJ90805
Other alias-
HGNC (Hugo) TMEM145
LocusID (NCBI) 284339
Atlas_Id 74806
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 42313325 and ends at 42325062 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM145   26912
Cards
Entrez_Gene (NCBI)TMEM145  284339  transmembrane protein 145
Aliases
GeneCards (Weizmann)TMEM145
Ensembl hg19 (Hinxton)ENSG00000167619 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167619 [Gene_View]  chr19:42313325-42325062 [Contig_View]  TMEM145 [Vega]
ICGC DataPortalENSG00000167619
TCGA cBioPortalTMEM145
AceView (NCBI)TMEM145
Genatlas (Paris)TMEM145
WikiGenes284339
SOURCE (Princeton)TMEM145
Genetics Home Reference (NIH)TMEM145
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM145  -     chr19:42313325-42325062 +  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM145  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM145 - 19q13.2 [CytoView hg19]  TMEM145 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBITMEM145 [Mapview hg19]  TMEM145 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK075286 DA694683
RefSeq transcript (Entrez)NM_173633
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM145
Cluster EST : UnigeneHs.382075 [ NCBI ]
CGAP (NCI)Hs.382075
Alternative Splicing GalleryENSG00000167619
Gene ExpressionTMEM145 [ NCBI-GEO ]   TMEM145 [ EBI - ARRAY_EXPRESS ]   TMEM145 [ SEEK ]   TMEM145 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM145 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284339
GTEX Portal (Tissue expression)TMEM145
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBT3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBT3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBT3
Splice isoforms : SwissVarQ8NBT3
PhosPhoSitePlusQ8NBT3
Domains : Interpro (EBI)Intimal_thickness-rel_rcpt   
Domain families : Pfam (Sanger)GpcrRhopsn4 (PF10192)   
Domain families : Pfam (NCBI)pfam10192   
Conserved Domain (NCBI)TMEM145
DMDM Disease mutations284339
Blocks (Seattle)TMEM145
SuperfamilyQ8NBT3
Human Protein AtlasENSG00000167619
Peptide AtlasQ8NBT3
HPRD08300
IPIIPI00168318   IPI00903049   
Protein Interaction databases
DIP (DOE-UCLA)Q8NBT3
IntAct (EBI)Q8NBT3
FunCoupENSG00000167619
BioGRIDTMEM145
STRING (EMBL)TMEM145
ZODIACTMEM145
Ontologies - Pathways
QuickGOQ8NBT3
Ontology : AmiGOG-protein coupled receptor signaling pathway  integral component of membrane  response to pheromone  
Ontology : EGO-EBIG-protein coupled receptor signaling pathway  integral component of membrane  response to pheromone  
NDEx NetworkTMEM145
Atlas of Cancer Signalling NetworkTMEM145
Wikipedia pathwaysTMEM145
Orthology - Evolution
OrthoDB284339
GeneTree (enSembl)ENSG00000167619
Phylogenetic Trees/Animal Genes : TreeFamTMEM145
HOVERGENQ8NBT3
HOGENOMQ8NBT3
Homologs : HomoloGeneTMEM145
Homology/Alignments : Family Browser (UCSC)TMEM145
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM145 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM145
dbVarTMEM145
ClinVarTMEM145
1000_GenomesTMEM145 
Exome Variant ServerTMEM145
ExAC (Exome Aggregation Consortium)TMEM145 (select the gene name)
Genetic variants : HAPMAP284339
Genomic Variants (DGV)TMEM145 [DGVbeta]
DECIPHERTMEM145 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM145 
Mutations
ICGC Data PortalTMEM145 
TCGA Data PortalTMEM145 
Broad Tumor PortalTMEM145
OASIS PortalTMEM145 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM145  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM145
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM145
DgiDB (Drug Gene Interaction Database)TMEM145
DoCM (Curated mutations)TMEM145 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM145 (select a term)
intoGenTMEM145
Cancer3DTMEM145(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM145
Genetic Testing Registry TMEM145
NextProtQ8NBT3 [Medical]
TSGene284339
GENETestsTMEM145
Target ValidationTMEM145
Huge Navigator TMEM145 [HugePedia]
snp3D : Map Gene to Disease284339
BioCentury BCIQTMEM145
ClinGenTMEM145
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284339
Chemical/Pharm GKB GenePA144596253
Clinical trialTMEM145
Miscellaneous
canSAR (ICR)TMEM145 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM145
EVEXTMEM145
GoPubMedTMEM145
iHOPTMEM145
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:45:53 CEST 2017

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