Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TMEM147-AS1 (TMEM147 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) TMEM147-AS1
LocusID (NCBI) 100506469
Atlas_Id 74808
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 35540738 and ends at 35546029 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM147-AS1   51273
Cards
Entrez_Gene (NCBI)TMEM147-AS1  100506469  TMEM147 antisense RNA 1
Aliases
GeneCards (Weizmann)TMEM147-AS1
Ensembl hg19 (Hinxton)ENSG00000236144 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236144 [Gene_View]  chr19:35540738-35546029 [Contig_View]  TMEM147-AS1 [Vega]
ICGC DataPortalENSG00000236144
TCGA cBioPortalTMEM147-AS1
AceView (NCBI)TMEM147-AS1
Genatlas (Paris)TMEM147-AS1
WikiGenes100506469
SOURCE (Princeton)TMEM147-AS1
Genetics Home Reference (NIH)TMEM147-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM147-AS1  -     chr19:35540738-35546029 -  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM147-AS1  -     19q13.12   [Description]    (hg19-Feb_2009)
EnsemblTMEM147-AS1 - 19q13.12 [CytoView hg19]  TMEM147-AS1 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBITMEM147-AS1 [Mapview hg19]  TMEM147-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092032 BC024262 CR627053
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM147-AS1
Cluster EST : UnigeneHs.661816 [ NCBI ]
CGAP (NCI)Hs.661816
Alternative Splicing GalleryENSG00000236144
Gene ExpressionTMEM147-AS1 [ NCBI-GEO ]   TMEM147-AS1 [ EBI - ARRAY_EXPRESS ]   TMEM147-AS1 [ SEEK ]   TMEM147-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM147-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506469
GTEX Portal (Tissue expression)TMEM147-AS1
Human Protein AtlasENSG00000236144-TMEM147-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM147-AS1
DMDM Disease mutations100506469
Blocks (Seattle)TMEM147-AS1
Human Protein Atlas [tissue]ENSG00000236144-TMEM147-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000236144
BioGRIDTMEM147-AS1
STRING (EMBL)TMEM147-AS1
ZODIACTMEM147-AS1
Ontologies - Pathways
Huge Navigator TMEM147-AS1 [HugePedia]
snp3D : Map Gene to Disease100506469
BioCentury BCIQTMEM147-AS1
ClinGenTMEM147-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506469
Clinical trialTMEM147-AS1
Miscellaneous
canSAR (ICR)TMEM147-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM147-AS1
EVEXTMEM147-AS1
GoPubMedTMEM147-AS1
iHOPTMEM147-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:32:45 CET 2017

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