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TMEM14C (transmembrane protein 14C)

Identity

Alias (NCBI)C6orf53
HSPC194
MSTP073
NET26
bA421M1.6
HGNC (Hugo) TMEM14C
HGNC Alias symbHSPC194
bA421M1.6
NET26
HGNC Previous nameC6orf53
HGNC Previous namechromosome 6 open reading frame 53
LocusID (NCBI) 51522
Atlas_Id 74811
Location 6p24.2  [Link to chromosome band 6p24]
Location_base_pair Starts at 10723070 and ends at 10731127 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM14C (6p24.2) / PAK1IP1 (6p24.2)TMEM14C (6p24.2) / TMEM14C (6p24.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM14C   20952
Cards
Entrez_Gene (NCBI)TMEM14C    transmembrane protein 14C
AliasesC6orf53; HSPC194; MSTP073; NET26; 
bA421M1.6
GeneCards (Weizmann)TMEM14C
Ensembl hg19 (Hinxton)ENSG00000111843 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111843 [Gene_View]  ENSG00000111843 [Sequence]  chr6:10723070-10731127 [Contig_View]  TMEM14C [Vega]
ICGC DataPortalENSG00000111843
TCGA cBioPortalTMEM14C
AceView (NCBI)TMEM14C
Genatlas (Paris)TMEM14C
SOURCE (Princeton)TMEM14C
Genetics Home Reference (NIH)TMEM14C
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM14C  -     chr6:10723070-10731127 +  6p24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM14C  -     6p24.2   [Description]    (hg19-Feb_2009)
GoldenPathTMEM14C - 6p24.2 [CytoView hg19]  TMEM14C - 6p24.2 [CytoView hg38]
ImmunoBaseENSG00000111843
Genome Data Viewer NCBITMEM14C [Mapview hg19]  
OMIM615318   
Gene and transcription
Genbank (Entrez)AF151028 AF164962 AK223462 AK309591 AK310191
RefSeq transcript (Entrez)NM_001165258 NM_016462
Consensus coding sequences : CCDS (NCBI)TMEM14C
Gene ExpressionTMEM14C [ NCBI-GEO ]   TMEM14C [ EBI - ARRAY_EXPRESS ]   TMEM14C [ SEEK ]   TMEM14C [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM14C [ Firebrowse - Broad ]
GenevisibleExpression of TMEM14C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51522
GTEX Portal (Tissue expression)TMEM14C
Human Protein AtlasENSG00000111843-TMEM14C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P0S9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P0S9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P0S9
PhosPhoSitePlusQ9P0S9
Domains : Interpro (EBI)TMEM14   
Domain families : Pfam (Sanger)Tmemb_14 (PF03647)   
Domain families : Pfam (NCBI)pfam03647   
Conserved Domain (NCBI)TMEM14C
PDB (RSDB)2LOS   
PDB Europe2LOS   
PDB (PDBSum)2LOS   
PDB (IMB)2LOS   
Structural Biology KnowledgeBase2LOS   
SCOP (Structural Classification of Proteins)2LOS   
CATH (Classification of proteins structures)2LOS   
SuperfamilyQ9P0S9
AlphaFold pdb e-kbQ9P0S9   
Human Protein Atlas [tissue]ENSG00000111843-TMEM14C [tissue]
HPRD15524
Protein Interaction databases
DIP (DOE-UCLA)Q9P0S9
IntAct (EBI)Q9P0S9
BioGRIDTMEM14C
STRING (EMBL)TMEM14C
ZODIACTMEM14C
Ontologies - Pathways
QuickGOQ9P0S9
Ontology : AmiGOprotein binding  mitochondrial inner membrane  heme biosynthetic process  mitochondrial transport  integral component of membrane  erythrocyte differentiation  mitochondrial membrane  regulation of heme biosynthetic process  
Ontology : EGO-EBIprotein binding  mitochondrial inner membrane  heme biosynthetic process  mitochondrial transport  integral component of membrane  erythrocyte differentiation  mitochondrial membrane  regulation of heme biosynthetic process  
NDEx NetworkTMEM14C
Atlas of Cancer Signalling NetworkTMEM14C
Wikipedia pathwaysTMEM14C
Orthology - Evolution
OrthoDB51522
GeneTree (enSembl)ENSG00000111843
Phylogenetic Trees/Animal Genes : TreeFamTMEM14C
Homologs : HomoloGeneTMEM14C
Homology/Alignments : Family Browser (UCSC)TMEM14C
Gene fusions - Rearrangements
Fusion : QuiverTMEM14C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM14C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM14C
dbVarTMEM14C
ClinVarTMEM14C
MonarchTMEM14C
1000_GenomesTMEM14C 
Exome Variant ServerTMEM14C
GNOMAD BrowserENSG00000111843
Varsome BrowserTMEM14C
ACMGTMEM14C variants
VarityQ9P0S9
Genomic Variants (DGV)TMEM14C [DGVbeta]
DECIPHERTMEM14C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM14C 
Mutations
ICGC Data PortalTMEM14C 
TCGA Data PortalTMEM14C 
Broad Tumor PortalTMEM14C
OASIS PortalTMEM14C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM14C  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM14C
Mutations and Diseases : HGMDTMEM14C
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM14C
DgiDB (Drug Gene Interaction Database)TMEM14C
DoCM (Curated mutations)TMEM14C
CIViC (Clinical Interpretations of Variants in Cancer)TMEM14C
Cancer3DTMEM14C
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615318   
Orphanet
DisGeNETTMEM14C
MedgenTMEM14C
Genetic Testing Registry TMEM14C
NextProtQ9P0S9 [Medical]
GENETestsTMEM14C
Target ValidationTMEM14C
Huge Navigator TMEM14C [HugePedia]
ClinGenTMEM14C
Clinical trials, drugs, therapy
MyCancerGenomeTMEM14C
Protein Interactions : CTDTMEM14C
Pharm GKB GenePA134874746
PharosQ9P0S9
Clinical trialTMEM14C
Miscellaneous
canSAR (ICR)TMEM14C
HarmonizomeTMEM14C
DataMed IndexTMEM14C
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM14C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:50 CEST 2021

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