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TMEM14C (transmembrane protein 14C)

Identity

Alias_namesC6orf53
chromosome 6 open reading frame 53
Alias_symbol (synonym)HSPC194
bA421M1.6
NET26
Other aliasMSTP073
HGNC (Hugo) TMEM14C
LocusID (NCBI) 51522
Atlas_Id 74811
Location 6p24.2  [Link to chromosome band 6p24]
Location_base_pair Starts at 10722915 and ends at 10731129 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TMEM14C (6p24.2) / PAK1IP1 (6p24.2)TMEM14C (6p24.2) / TMEM14C (6p24.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM14C   20952
Cards
Entrez_Gene (NCBI)TMEM14C  51522  transmembrane protein 14C
AliasesC6orf53; HSPC194; MSTP073; NET26; 
bA421M1.6
GeneCards (Weizmann)TMEM14C
Ensembl hg19 (Hinxton)ENSG00000111843 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111843 [Gene_View]  chr6:10722915-10731129 [Contig_View]  TMEM14C [Vega]
ICGC DataPortalENSG00000111843
TCGA cBioPortalTMEM14C
AceView (NCBI)TMEM14C
Genatlas (Paris)TMEM14C
WikiGenes51522
SOURCE (Princeton)TMEM14C
Genetics Home Reference (NIH)TMEM14C
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM14C  -     chr6:10722915-10731129 +  6p24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM14C  -     6p24.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM14C - 6p24.2 [CytoView hg19]  TMEM14C - 6p24.2 [CytoView hg38]
Mapping of homologs : NCBITMEM14C [Mapview hg19]  TMEM14C [Mapview hg38]
OMIM615318   
Gene and transcription
Genbank (Entrez)AF151028 AF164962 AK223462 AK309591 AK310191
RefSeq transcript (Entrez)NM_001165258 NM_016462
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM14C
Cluster EST : UnigeneHs.519557 [ NCBI ]
CGAP (NCI)Hs.519557
Alternative Splicing GalleryENSG00000111843
Gene ExpressionTMEM14C [ NCBI-GEO ]   TMEM14C [ EBI - ARRAY_EXPRESS ]   TMEM14C [ SEEK ]   TMEM14C [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM14C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51522
GTEX Portal (Tissue expression)TMEM14C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P0S9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P0S9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P0S9
Splice isoforms : SwissVarQ9P0S9
PhosPhoSitePlusQ9P0S9
Domains : Interpro (EBI)TMEM14   
Domain families : Pfam (Sanger)Tmemb_14 (PF03647)   
Domain families : Pfam (NCBI)pfam03647   
Conserved Domain (NCBI)TMEM14C
DMDM Disease mutations51522
Blocks (Seattle)TMEM14C
PDB (SRS)2LOS   
PDB (PDBSum)2LOS   
PDB (IMB)2LOS   
PDB (RSDB)2LOS   
Structural Biology KnowledgeBase2LOS   
SCOP (Structural Classification of Proteins)2LOS   
CATH (Classification of proteins structures)2LOS   
SuperfamilyQ9P0S9
Human Protein AtlasENSG00000111843
Peptide AtlasQ9P0S9
HPRD15524
IPIIPI00009346   IPI00384919   
Protein Interaction databases
DIP (DOE-UCLA)Q9P0S9
IntAct (EBI)Q9P0S9
FunCoupENSG00000111843
BioGRIDTMEM14C
STRING (EMBL)TMEM14C
ZODIACTMEM14C
Ontologies - Pathways
QuickGOQ9P0S9
Ontology : AmiGOprotein binding  heme biosynthetic process  integral component of membrane  mitochondrial membrane  
Ontology : EGO-EBIprotein binding  heme biosynthetic process  integral component of membrane  mitochondrial membrane  
NDEx NetworkTMEM14C
Atlas of Cancer Signalling NetworkTMEM14C
Wikipedia pathwaysTMEM14C
Orthology - Evolution
OrthoDB51522
GeneTree (enSembl)ENSG00000111843
Phylogenetic Trees/Animal Genes : TreeFamTMEM14C
HOVERGENQ9P0S9
HOGENOMQ9P0S9
Homologs : HomoloGeneTMEM14C
Homology/Alignments : Family Browser (UCSC)TMEM14C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM14C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM14C
dbVarTMEM14C
ClinVarTMEM14C
1000_GenomesTMEM14C 
Exome Variant ServerTMEM14C
ExAC (Exome Aggregation Consortium)TMEM14C (select the gene name)
Genetic variants : HAPMAP51522
Genomic Variants (DGV)TMEM14C [DGVbeta]
DECIPHERTMEM14C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM14C 
Mutations
ICGC Data PortalTMEM14C 
TCGA Data PortalTMEM14C 
Broad Tumor PortalTMEM14C
OASIS PortalTMEM14C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM14C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM14C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TMEM14C
DgiDB (Drug Gene Interaction Database)TMEM14C
DoCM (Curated mutations)TMEM14C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM14C (select a term)
intoGenTMEM14C
Cancer3DTMEM14C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615318   
Orphanet
MedgenTMEM14C
Genetic Testing Registry TMEM14C
NextProtQ9P0S9 [Medical]
TSGene51522
GENETestsTMEM14C
Target ValidationTMEM14C
Huge Navigator TMEM14C [HugePedia]
snp3D : Map Gene to Disease51522
BioCentury BCIQTMEM14C
ClinGenTMEM14C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51522
Chemical/Pharm GKB GenePA134874746
Clinical trialTMEM14C
Miscellaneous
canSAR (ICR)TMEM14C (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM14C
EVEXTMEM14C
GoPubMedTMEM14C
iHOPTMEM14C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:42 CEST 2017

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