Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMEM14E (transmembrane protein 14E)

Identity

Other alias-
HGNC (Hugo) TMEM14E
LocusID (NCBI) 645843
Atlas_Id 74812
Location 3q25.1  [Link to chromosome band 3q25]
Location_base_pair Starts at 152057487 and ends at 152058779 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM14E   34386
Cards
Entrez_Gene (NCBI)TMEM14E  645843  transmembrane protein 14E
Aliases
GeneCards (Weizmann)TMEM14E
Ensembl hg19 (Hinxton) [Gene_View]  chr3:152057487-152058779 [Contig_View]  TMEM14E [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:152057487-152058779 [Contig_View]  TMEM14E [Vega]
TCGA cBioPortalTMEM14E
AceView (NCBI)TMEM14E
Genatlas (Paris)TMEM14E
WikiGenes645843
SOURCE (Princeton)TMEM14E
Genetics Home Reference (NIH)TMEM14E
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM14E  -     chr3:152057487-152058779 -  3q25.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM14E  -     3q25.1   [Description]    (hg38-Dec_2013)
EnsemblTMEM14E - 3q25.1 [CytoView hg19]  TMEM14E - 3q25.1 [CytoView hg38]
Mapping of homologs : NCBITMEM14E [Mapview hg19]  TMEM14E [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW866456 AY358260
RefSeq transcript (Entrez)NM_001123228
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)TMEM14E
Cluster EST : UnigeneHs.632562 [ NCBI ]
CGAP (NCI)Hs.632562
Gene ExpressionTMEM14E [ NCBI-GEO ]   TMEM14E [ EBI - ARRAY_EXPRESS ]   TMEM14E [ SEEK ]   TMEM14E [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM14E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)645843
GTEX Portal (Tissue expression)TMEM14E
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXP3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXP3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXP3
Splice isoforms : SwissVarQ6UXP3
PhosPhoSitePlusQ6UXP3
Domains : Interpro (EBI)UPF0136_TM   
Domain families : Pfam (Sanger)Tmemb_14 (PF03647)   
Domain families : Pfam (NCBI)pfam03647   
Conserved Domain (NCBI)TMEM14E
DMDM Disease mutations645843
Blocks (Seattle)TMEM14E
SuperfamilyQ6UXP3
Peptide AtlasQ6UXP3
IPIIPI00414798   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXP3
IntAct (EBI)Q6UXP3
BioGRIDTMEM14E
STRING (EMBL)TMEM14E
ZODIACTMEM14E
Ontologies - Pathways
QuickGOQ6UXP3
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM14E
Atlas of Cancer Signalling NetworkTMEM14E
Wikipedia pathwaysTMEM14E
Orthology - Evolution
OrthoDB645843
Phylogenetic Trees/Animal Genes : TreeFamTMEM14E
HOVERGENQ6UXP3
HOGENOMQ6UXP3
Homologs : HomoloGeneTMEM14E
Homology/Alignments : Family Browser (UCSC)TMEM14E
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM14E [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM14E
dbVarTMEM14E
ClinVarTMEM14E
1000_GenomesTMEM14E 
Exome Variant ServerTMEM14E
ExAC (Exome Aggregation Consortium)TMEM14E (select the gene name)
Genetic variants : HAPMAP645843
Genomic Variants (DGV)TMEM14E [DGVbeta]
DECIPHER (Syndromes)3:152057487-152058779  
CONAN: Copy Number AnalysisTMEM14E 
Mutations
ICGC Data PortalTMEM14E 
TCGA Data PortalTMEM14E 
Broad Tumor PortalTMEM14E
OASIS PortalTMEM14E [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM14E  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM14E
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM14E
DgiDB (Drug Gene Interaction Database)TMEM14E
DoCM (Curated mutations)TMEM14E (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM14E (select a term)
intoGenTMEM14E
Cancer3DTMEM14E(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM14E
Genetic Testing Registry TMEM14E
NextProtQ6UXP3 [Medical]
TSGene645843
GENETestsTMEM14E
Huge Navigator TMEM14E [HugePedia]
snp3D : Map Gene to Disease645843
BioCentury BCIQTMEM14E
ClinGenTMEM14E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645843
Chemical/Pharm GKB GenePA162405891
Clinical trialTMEM14E
Miscellaneous
canSAR (ICR)TMEM14E (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM14E
EVEXTMEM14E
GoPubMedTMEM14E
iHOPTMEM14E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:48:29 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.