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TMEM150A (transmembrane protein 150A)

Identity

Alias (NCBI)TM6P1
TMEM150
TTN1
HGNC (Hugo) TMEM150A
HGNC Alias symbTM6P1
FLJ90024
HGNC Previous nameTMEM150
HGNC Previous nametransmembrane protein 150
LocusID (NCBI) 129303
Atlas_Id 74813
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 85598547 and ends at 85602699 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CSGALNACT1 (8p21.3) / TMEM150A (2p11.2)TMEM150A (2p11.2) / CAPN10 (2q37.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM150A   24677
Cards
Entrez_Gene (NCBI)TMEM150A    transmembrane protein 150A
AliasesTM6P1; TMEM150; TTN1
GeneCards (Weizmann)TMEM150A
Ensembl hg19 (Hinxton)ENSG00000168890 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168890 [Gene_View]  ENSG00000168890 [Sequence]  chr2:85598547-85602699 [Contig_View]  TMEM150A [Vega]
ICGC DataPortalENSG00000168890
TCGA cBioPortalTMEM150A
AceView (NCBI)TMEM150A
Genatlas (Paris)TMEM150A
SOURCE (Princeton)TMEM150A
Genetics Home Reference (NIH)TMEM150A
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM150A  -     chr2:85598547-85602699 -  2p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM150A  -     2p11.2   [Description]    (hg19-Feb_2009)
GoldenPathTMEM150A - 2p11.2 [CytoView hg19]  TMEM150A - 2p11.2 [CytoView hg38]
ImmunoBaseENSG00000168890
Genome Data Viewer NCBITMEM150A [Mapview hg19]  
OMIM616757   
Gene and transcription
Genbank (Entrez)AK074505 AK098152 AK291879 AW009533 BC050466
RefSeq transcript (Entrez)NM_001031738 NM_001369917 NM_153342
Consensus coding sequences : CCDS (NCBI)TMEM150A
Gene ExpressionTMEM150A [ NCBI-GEO ]   TMEM150A [ EBI - ARRAY_EXPRESS ]   TMEM150A [ SEEK ]   TMEM150A [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM150A [ Firebrowse - Broad ]
GenevisibleExpression of TMEM150A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)129303
GTEX Portal (Tissue expression)TMEM150A
Human Protein AtlasENSG00000168890-TMEM150A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86TG1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86TG1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86TG1
PhosPhoSitePlusQ86TG1
Domains : Interpro (EBI)Frag1/DRAM/Sfk1    TMEM150A   
Domain families : Pfam (Sanger)Frag1 (PF10277)   
Domain families : Pfam (NCBI)pfam10277   
Conserved Domain (NCBI)TMEM150A
SuperfamilyQ86TG1
AlphaFold pdb e-kbQ86TG1   
Human Protein Atlas [tissue]ENSG00000168890-TMEM150A [tissue]
HPRD17006
Protein Interaction databases
DIP (DOE-UCLA)Q86TG1
IntAct (EBI)Q86TG1
BioGRIDTMEM150A
STRING (EMBL)TMEM150A
ZODIACTMEM150A
Ontologies - Pathways
QuickGOQ86TG1
Ontology : AmiGOprotein binding  integral component of plasma membrane  integral component of plasma membrane  catabolic process  phosphatidylinositol phosphate biosynthetic process  protein localization to plasma membrane  protein localization to plasma membrane  
Ontology : EGO-EBIprotein binding  integral component of plasma membrane  integral component of plasma membrane  catabolic process  phosphatidylinositol phosphate biosynthetic process  protein localization to plasma membrane  protein localization to plasma membrane  
NDEx NetworkTMEM150A
Atlas of Cancer Signalling NetworkTMEM150A
Wikipedia pathwaysTMEM150A
Orthology - Evolution
OrthoDB129303
GeneTree (enSembl)ENSG00000168890
Phylogenetic Trees/Animal Genes : TreeFamTMEM150A
Homologs : HomoloGeneTMEM150A
Homology/Alignments : Family Browser (UCSC)TMEM150A
Gene fusions - Rearrangements
Fusion : QuiverTMEM150A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM150A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM150A
dbVarTMEM150A
ClinVarTMEM150A
MonarchTMEM150A
1000_GenomesTMEM150A 
Exome Variant ServerTMEM150A
GNOMAD BrowserENSG00000168890
Varsome BrowserTMEM150A
ACMGTMEM150A variants
VarityQ86TG1
Genomic Variants (DGV)TMEM150A [DGVbeta]
DECIPHERTMEM150A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM150A 
Mutations
ICGC Data PortalTMEM150A 
TCGA Data PortalTMEM150A 
Broad Tumor PortalTMEM150A
OASIS PortalTMEM150A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM150A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM150A
Mutations and Diseases : HGMDTMEM150A
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM150A
DgiDB (Drug Gene Interaction Database)TMEM150A
DoCM (Curated mutations)TMEM150A
CIViC (Clinical Interpretations of Variants in Cancer)TMEM150A
Cancer3DTMEM150A
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616757   
Orphanet
DisGeNETTMEM150A
MedgenTMEM150A
Genetic Testing Registry TMEM150A
NextProtQ86TG1 [Medical]
GENETestsTMEM150A
Target ValidationTMEM150A
Huge Navigator TMEM150A [HugePedia]
ClinGenTMEM150A
Clinical trials, drugs, therapy
MyCancerGenomeTMEM150A
Protein Interactions : CTDTMEM150A
Pharm GKB GenePA165697532
PharosQ86TG1
Clinical trialTMEM150A
Miscellaneous
canSAR (ICR)TMEM150A
HarmonizomeTMEM150A
DataMed IndexTMEM150A
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM150A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:51 CEST 2021

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