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TMEM150C (transmembrane protein 150C)

Identity

Alias (NCBI)TTN3
HGNC (Hugo) TMEM150C
HGNC Alias symbFLJ12993
LocusID (NCBI) 441027
Atlas_Id 74815
Location 4q21.22  [Link to chromosome band 4q21]
Location_base_pair Starts at 82483176 and ends at 82561988 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM150C (4q21.22) / SCD5 (4q21.22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM150C   37263
Cards
Entrez_Gene (NCBI)TMEM150C    transmembrane protein 150C
AliasesTTN3
GeneCards (Weizmann)TMEM150C
Ensembl hg19 (Hinxton)ENSG00000249242 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249242 [Gene_View]  ENSG00000249242 [Sequence]  chr4:82483176-82561988 [Contig_View]  TMEM150C [Vega]
ICGC DataPortalENSG00000249242
TCGA cBioPortalTMEM150C
AceView (NCBI)TMEM150C
Genatlas (Paris)TMEM150C
SOURCE (Princeton)TMEM150C
Genetics Home Reference (NIH)TMEM150C
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM150C  -     chr4:82483176-82561988 -  4q21.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM150C  -     4q21.22   [Description]    (hg19-Feb_2009)
GoldenPathTMEM150C - 4q21.22 [CytoView hg19]  TMEM150C - 4q21.22 [CytoView hg38]
ImmunoBaseENSG00000249242
Genome Data Viewer NCBITMEM150C [Mapview hg19]  
OMIM617292   
Gene and transcription
Genbank (Entrez)AK023055 AK297434 AK297512 AK299942 AK301116
RefSeq transcript (Entrez)NM_001080506 NM_001353454 NM_001353455
Consensus coding sequences : CCDS (NCBI)TMEM150C
Gene ExpressionTMEM150C [ NCBI-GEO ]   TMEM150C [ EBI - ARRAY_EXPRESS ]   TMEM150C [ SEEK ]   TMEM150C [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM150C [ Firebrowse - Broad ]
GenevisibleExpression of TMEM150C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441027
GTEX Portal (Tissue expression)TMEM150C
Human Protein AtlasENSG00000249242-TMEM150C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtB9EJG8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB9EJG8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB9EJG8
PhosPhoSitePlusB9EJG8
Domains : Interpro (EBI)Frag1/DRAM/Sfk1   
Domain families : Pfam (Sanger)Frag1 (PF10277)   
Domain families : Pfam (NCBI)pfam10277   
Conserved Domain (NCBI)TMEM150C
SuperfamilyB9EJG8
AlphaFold pdb e-kbB9EJG8   
Human Protein Atlas [tissue]ENSG00000249242-TMEM150C [tissue]
Protein Interaction databases
DIP (DOE-UCLA)B9EJG8
IntAct (EBI)B9EJG8
BioGRIDTMEM150C
STRING (EMBL)TMEM150C
ZODIACTMEM150C
Ontologies - Pathways
QuickGOB9EJG8
Ontology : AmiGOlysosomal membrane  integral component of plasma membrane  integral component of plasma membrane  mechanosensitive ion channel activity  proprioception  ion transmembrane transport  cellular response to mechanical stimulus  
Ontology : EGO-EBIlysosomal membrane  integral component of plasma membrane  integral component of plasma membrane  mechanosensitive ion channel activity  proprioception  ion transmembrane transport  cellular response to mechanical stimulus  
NDEx NetworkTMEM150C
Atlas of Cancer Signalling NetworkTMEM150C
Wikipedia pathwaysTMEM150C
Orthology - Evolution
OrthoDB441027
GeneTree (enSembl)ENSG00000249242
Phylogenetic Trees/Animal Genes : TreeFamTMEM150C
Homologs : HomoloGeneTMEM150C
Homology/Alignments : Family Browser (UCSC)TMEM150C
Gene fusions - Rearrangements
Fusion : QuiverTMEM150C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM150C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM150C
dbVarTMEM150C
ClinVarTMEM150C
MonarchTMEM150C
1000_GenomesTMEM150C 
Exome Variant ServerTMEM150C
GNOMAD BrowserENSG00000249242
Varsome BrowserTMEM150C
ACMGTMEM150C variants
VarityB9EJG8
Genomic Variants (DGV)TMEM150C [DGVbeta]
DECIPHERTMEM150C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM150C 
Mutations
ICGC Data PortalTMEM150C 
TCGA Data PortalTMEM150C 
Broad Tumor PortalTMEM150C
OASIS PortalTMEM150C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM150C  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM150C
Mutations and Diseases : HGMDTMEM150C
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM150C
DgiDB (Drug Gene Interaction Database)TMEM150C
DoCM (Curated mutations)TMEM150C
CIViC (Clinical Interpretations of Variants in Cancer)TMEM150C
Cancer3DTMEM150C
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617292   
Orphanet
DisGeNETTMEM150C
MedgenTMEM150C
Genetic Testing Registry TMEM150C
NextProtB9EJG8 [Medical]
GENETestsTMEM150C
Target ValidationTMEM150C
Huge Navigator TMEM150C [HugePedia]
ClinGenTMEM150C
Clinical trials, drugs, therapy
MyCancerGenomeTMEM150C
Protein Interactions : CTDTMEM150C
Pharm GKB GenePA165664735
PharosB9EJG8
Clinical trialTMEM150C
Miscellaneous
canSAR (ICR)TMEM150C
HarmonizomeTMEM150C
DataMed IndexTMEM150C
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM150C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:51 CEST 2021

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