Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMEM151B (transmembrane protein 151B)

Identity

Alias_namesC6orf137
TMEM193
chromosome 6 open reading frame 137
transmembrane protein 193
Alias_symbol (synonym)bA444E17.5
Other alias
HGNC (Hugo) TMEM151B
LocusID (NCBI) 441151
Atlas_Id 74817
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 44270743 and ends at 44279445 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MLLT4 (6q27) / TMEM151B (6p21.1)TMEM151B (6p21.1) / MT1A (16q12.2)TMEM151B (6p21.1) / RETSAT (2p11.2)
TSPAN18 (11p11.2) / TMEM151B (6p21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM151B   21315
Cards
Entrez_Gene (NCBI)TMEM151B  441151  transmembrane protein 151B
AliasesC6orf137; TMEM193; bA444E17.5
GeneCards (Weizmann)TMEM151B
Ensembl hg19 (Hinxton)ENSG00000178233 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178233 [Gene_View]  ENSG00000178233 [Sequence]  chr6:44270743-44279445 [Contig_View]  TMEM151B [Vega]
ICGC DataPortalENSG00000178233
TCGA cBioPortalTMEM151B
AceView (NCBI)TMEM151B
Genatlas (Paris)TMEM151B
WikiGenes441151
SOURCE (Princeton)TMEM151B
Genetics Home Reference (NIH)TMEM151B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM151B  -     chr6:44270743-44279445 +  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM151B  -     6p21.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM151B - 6p21.1 [CytoView hg19]  TMEM151B - 6p21.1 [CytoView hg38]
Mapping of homologs : NCBITMEM151B [Mapview hg19]  TMEM151B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094365 AK124502 AK126839 BE671218 BM664874
RefSeq transcript (Entrez)NM_001039704 NM_001137560
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM151B
Cluster EST : UnigeneHs.632851 [ NCBI ]
CGAP (NCI)Hs.632851
Alternative Splicing GalleryENSG00000178233
Gene ExpressionTMEM151B [ NCBI-GEO ]   TMEM151B [ EBI - ARRAY_EXPRESS ]   TMEM151B [ SEEK ]   TMEM151B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM151B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441151
GTEX Portal (Tissue expression)TMEM151B
Human Protein AtlasENSG00000178233-TMEM151B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IW70   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IW70  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IW70
Splice isoforms : SwissVarQ8IW70
PhosPhoSitePlusQ8IW70
Domains : Interpro (EBI)Tmem151   
Domain families : Pfam (Sanger)TMEM151 (PF14857)   
Domain families : Pfam (NCBI)pfam14857   
Conserved Domain (NCBI)TMEM151B
DMDM Disease mutations441151
Blocks (Seattle)TMEM151B
SuperfamilyQ8IW70
Human Protein Atlas [tissue]ENSG00000178233-TMEM151B [tissue]
Peptide AtlasQ8IW70
IPIIPI00784306   IPI00645485   IPI00984473   IPI00965670   
Protein Interaction databases
DIP (DOE-UCLA)Q8IW70
IntAct (EBI)Q8IW70
FunCoupENSG00000178233
BioGRIDTMEM151B
STRING (EMBL)TMEM151B
ZODIACTMEM151B
Ontologies - Pathways
QuickGOQ8IW70
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM151B
Atlas of Cancer Signalling NetworkTMEM151B
Wikipedia pathwaysTMEM151B
Orthology - Evolution
OrthoDB441151
GeneTree (enSembl)ENSG00000178233
Phylogenetic Trees/Animal Genes : TreeFamTMEM151B
HOVERGENQ8IW70
HOGENOMQ8IW70
Homologs : HomoloGeneTMEM151B
Homology/Alignments : Family Browser (UCSC)TMEM151B
Gene fusions - Rearrangements
Fusion : QuiverTMEM151B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM151B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM151B
dbVarTMEM151B
ClinVarTMEM151B
1000_GenomesTMEM151B 
Exome Variant ServerTMEM151B
ExAC (Exome Aggregation Consortium)ENSG00000178233
GNOMAD BrowserENSG00000178233
Varsome BrowserTMEM151B
Genetic variants : HAPMAP441151
Genomic Variants (DGV)TMEM151B [DGVbeta]
DECIPHERTMEM151B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM151B 
Mutations
ICGC Data PortalTMEM151B 
TCGA Data PortalTMEM151B 
Broad Tumor PortalTMEM151B
OASIS PortalTMEM151B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM151B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM151B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM151B
DgiDB (Drug Gene Interaction Database)TMEM151B
DoCM (Curated mutations)TMEM151B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM151B (select a term)
intoGenTMEM151B
Cancer3DTMEM151B(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM151B
MedgenTMEM151B
Genetic Testing Registry TMEM151B
NextProtQ8IW70 [Medical]
TSGene441151
GENETestsTMEM151B
Target ValidationTMEM151B
Huge Navigator TMEM151B [HugePedia]
snp3D : Map Gene to Disease441151
BioCentury BCIQTMEM151B
ClinGenTMEM151B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441151
Chemical/Pharm GKB GenePA162405899
Clinical trialTMEM151B
Miscellaneous
canSAR (ICR)TMEM151B (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM151B
EVEXTMEM151B
GoPubMedTMEM151B
iHOPTMEM151B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:35:18 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.