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TMEM156 (transmembrane protein 156)

Identity

Alias_symbol (synonym)FLJ23235
Other alias-
HGNC (Hugo) TMEM156
LocusID (NCBI) 80008
Atlas_Id 74820
Location 4p14  [Link to chromosome band 4p14]
Location_base_pair Starts at 38968366 and ends at 39034041 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM156   26260
Cards
Entrez_Gene (NCBI)TMEM156  80008  transmembrane protein 156
Aliases
GeneCards (Weizmann)TMEM156
Ensembl hg19 (Hinxton)ENSG00000121895 [Gene_View]  chr4:38968366-39034041 [Contig_View]  TMEM156 [Vega]
Ensembl hg38 (Hinxton)ENSG00000121895 [Gene_View]  chr4:38968366-39034041 [Contig_View]  TMEM156 [Vega]
ICGC DataPortalENSG00000121895
TCGA cBioPortalTMEM156
AceView (NCBI)TMEM156
Genatlas (Paris)TMEM156
WikiGenes80008
SOURCE (Princeton)TMEM156
Genetics Home Reference (NIH)TMEM156
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM156  -     chr4:38968366-39034041 -  4p14   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM156  -     4p14   [Description]    (hg38-Dec_2013)
EnsemblTMEM156 - 4p14 [CytoView hg19]  TMEM156 - 4p14 [CytoView hg38]
Mapping of homologs : NCBITMEM156 [Mapview hg19]  TMEM156 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026888 BC030803 BC060512
RefSeq transcript (Entrez)NM_001303228 NM_024943
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_006238 NW_004929317
Consensus coding sequences : CCDS (NCBI)TMEM156
Cluster EST : UnigeneHs.374147 [ NCBI ]
CGAP (NCI)Hs.374147
Alternative Splicing GalleryENSG00000121895
Gene ExpressionTMEM156 [ NCBI-GEO ]   TMEM156 [ EBI - ARRAY_EXPRESS ]   TMEM156 [ SEEK ]   TMEM156 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM156 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80008
GTEX Portal (Tissue expression)TMEM156
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N614   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N614  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N614
Splice isoforms : SwissVarQ8N614
PhosPhoSitePlusQ8N614
Domains : Interpro (EBI)TMEM156   
Domain families : Pfam (Sanger)TMEM156 (PF15106)   
Domain families : Pfam (NCBI)pfam15106   
Conserved Domain (NCBI)TMEM156
DMDM Disease mutations80008
Blocks (Seattle)TMEM156
SuperfamilyQ8N614
Human Protein AtlasENSG00000121895
Peptide AtlasQ8N614
HPRD08022
IPIIPI00297058   IPI00967728   
Protein Interaction databases
DIP (DOE-UCLA)Q8N614
IntAct (EBI)Q8N614
FunCoupENSG00000121895
BioGRIDTMEM156
STRING (EMBL)TMEM156
ZODIACTMEM156
Ontologies - Pathways
QuickGOQ8N614
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM156
Atlas of Cancer Signalling NetworkTMEM156
Wikipedia pathwaysTMEM156
Orthology - Evolution
OrthoDB80008
GeneTree (enSembl)ENSG00000121895
Phylogenetic Trees/Animal Genes : TreeFamTMEM156
HOVERGENQ8N614
HOGENOMQ8N614
Homologs : HomoloGeneTMEM156
Homology/Alignments : Family Browser (UCSC)TMEM156
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM156 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM156
dbVarTMEM156
ClinVarTMEM156
1000_GenomesTMEM156 
Exome Variant ServerTMEM156
ExAC (Exome Aggregation Consortium)TMEM156 (select the gene name)
Genetic variants : HAPMAP80008
Genomic Variants (DGV)TMEM156 [DGVbeta]
DECIPHER (Syndromes)4:38968366-39034041  ENSG00000121895
CONAN: Copy Number AnalysisTMEM156 
Mutations
ICGC Data PortalTMEM156 
TCGA Data PortalTMEM156 
Broad Tumor PortalTMEM156
OASIS PortalTMEM156 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM156  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM156
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM156
DgiDB (Drug Gene Interaction Database)TMEM156
DoCM (Curated mutations)TMEM156 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM156 (select a term)
intoGenTMEM156
Cancer3DTMEM156(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM156
Genetic Testing Registry TMEM156
NextProtQ8N614 [Medical]
TSGene80008
GENETestsTMEM156
Huge Navigator TMEM156 [HugePedia]
snp3D : Map Gene to Disease80008
BioCentury BCIQTMEM156
ClinGenTMEM156
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80008
Chemical/Pharm GKB GenePA145007464
Clinical trialTMEM156
Miscellaneous
canSAR (ICR)TMEM156 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM156
EVEXTMEM156
GoPubMedTMEM156
iHOPTMEM156
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:48:31 CET 2017

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