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TMEM158 (transmembrane protein 158)

Identity

Alias (NCBI)BBP
RIS1
p40BBP
HGNC (Hugo) TMEM158
HGNC Alias symbRIS1
p40BBp
HGNC Alias nameRas induced senescence 1
HGNC Previous nametransmembrane protein 158 (gene/pseudogene)
LocusID (NCBI) 25907
Atlas_Id 489
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 45224466 and ends at 45226287 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM158 (3p21.31) / CELF2 (10p14)TMEM158 (3p21.31) / RYR1 (19q13.2)TMEM158 (3p21.31) / TMEM158 (3p21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM158   30293
Cards
Entrez_Gene (NCBI)TMEM158    transmembrane protein 158
AliasesBBP; RIS1; p40BBP
GeneCards (Weizmann)TMEM158
Ensembl hg19 (Hinxton)ENSG00000249992 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249992 [Gene_View]  ENSG00000249992 [Sequence]  chr3:45224466-45226287 [Contig_View]  TMEM158 [Vega]
ICGC DataPortalENSG00000249992
TCGA cBioPortalTMEM158
AceView (NCBI)TMEM158
Genatlas (Paris)TMEM158
SOURCE (Princeton)TMEM158
Genetics Home Reference (NIH)TMEM158
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM158  -     chr3:45224466-45226287 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM158  -     3p21.31   [Description]    (hg19-Feb_2009)
GoldenPathTMEM158 - 3p21.31 [CytoView hg19]  TMEM158 - 3p21.31 [CytoView hg38]
ImmunoBaseENSG00000249992
Genome Data Viewer NCBITMEM158 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB078417 AF438313 AL080235 BC057390 BQ000094
RefSeq transcript (Entrez)NM_015444
Consensus coding sequences : CCDS (NCBI)TMEM158
Gene ExpressionTMEM158 [ NCBI-GEO ]   TMEM158 [ EBI - ARRAY_EXPRESS ]   TMEM158 [ SEEK ]   TMEM158 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM158 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM158 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25907
GTEX Portal (Tissue expression)TMEM158
Human Protein AtlasENSG00000249992-TMEM158 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WZ71   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WZ71  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WZ71
PhosPhoSitePlusQ8WZ71
Domains : Interpro (EBI)TMEM158   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM158
SuperfamilyQ8WZ71
AlphaFold pdb e-kbQ8WZ71   
Human Protein Atlas [tissue]ENSG00000249992-TMEM158 [tissue]
HPRD15252
Protein Interaction databases
DIP (DOE-UCLA)Q8WZ71
IntAct (EBI)Q8WZ71
BioGRIDTMEM158
STRING (EMBL)TMEM158
ZODIACTMEM158
Ontologies - Pathways
QuickGOQ8WZ71
Ontology : AmiGOintegral component of membrane  peptide binding  
Ontology : EGO-EBIintegral component of membrane  peptide binding  
NDEx NetworkTMEM158
Atlas of Cancer Signalling NetworkTMEM158
Wikipedia pathwaysTMEM158
Orthology - Evolution
OrthoDB25907
GeneTree (enSembl)ENSG00000249992
Phylogenetic Trees/Animal Genes : TreeFamTMEM158
Homologs : HomoloGeneTMEM158
Homology/Alignments : Family Browser (UCSC)TMEM158
Gene fusions - Rearrangements
Fusion : QuiverTMEM158
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM158 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM158
dbVarTMEM158
ClinVarTMEM158
MonarchTMEM158
1000_GenomesTMEM158 
Exome Variant ServerTMEM158
GNOMAD BrowserENSG00000249992
Varsome BrowserTMEM158
ACMGTMEM158 variants
VarityQ8WZ71
Genomic Variants (DGV)TMEM158 [DGVbeta]
DECIPHERTMEM158 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM158 
Mutations
ICGC Data PortalTMEM158 
TCGA Data PortalTMEM158 
Broad Tumor PortalTMEM158
OASIS PortalTMEM158 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM158  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM158
Mutations and Diseases : HGMDTMEM158
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM158
DgiDB (Drug Gene Interaction Database)TMEM158
DoCM (Curated mutations)TMEM158
CIViC (Clinical Interpretations of Variants in Cancer)TMEM158
Cancer3DTMEM158
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM158
MedgenTMEM158
Genetic Testing Registry TMEM158
NextProtQ8WZ71 [Medical]
GENETestsTMEM158
Target ValidationTMEM158
Huge Navigator TMEM158 [HugePedia]
ClinGenTMEM158
Clinical trials, drugs, therapy
MyCancerGenomeTMEM158
Protein Interactions : CTDTMEM158
Pharm GKB GenePA128395777
PharosQ8WZ71
Clinical trialTMEM158
Miscellaneous
canSAR (ICR)TMEM158
HarmonizomeTMEM158
DataMed IndexTMEM158
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM158
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:35:25 CEST 2021

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