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TMEM161A (transmembrane protein 161A)

Identity

Alias (NCBI)AROS-29
AROS29
HGNC (Hugo) TMEM161A
HGNC Alias symbFLJ39645
FLJ20422
LocusID (NCBI) 54929
Atlas_Id 51314
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 19119169 and ends at 19138478 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM161A (19p13.11) / ADCK4 (19q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM161A   26020
Cards
Entrez_Gene (NCBI)TMEM161A    transmembrane protein 161A
AliasesAROS-29; AROS29
GeneCards (Weizmann)TMEM161A
Ensembl hg19 (Hinxton)ENSG00000064545 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000064545 [Gene_View]  ENSG00000064545 [Sequence]  chr19:19119169-19138478 [Contig_View]  TMEM161A [Vega]
ICGC DataPortalENSG00000064545
TCGA cBioPortalTMEM161A
AceView (NCBI)TMEM161A
Genatlas (Paris)TMEM161A
SOURCE (Princeton)TMEM161A
Genetics Home Reference (NIH)TMEM161A
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM161A  -     chr19:19119169-19138478 -  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM161A  -     19p13.11   [Description]    (hg19-Feb_2009)
GoldenPathTMEM161A - 19p13.11 [CytoView hg19]  TMEM161A - 19p13.11 [CytoView hg38]
ImmunoBaseENSG00000064545
Genome Data Viewer NCBITMEM161A [Mapview hg19]  
OMIM618966   
Gene and transcription
Genbank (Entrez)AK000429 AK096964 AK225424 AY358088 BC005210
RefSeq transcript (Entrez)NM_001256766 NM_017814
Consensus coding sequences : CCDS (NCBI)TMEM161A
Gene ExpressionTMEM161A [ NCBI-GEO ]   TMEM161A [ EBI - ARRAY_EXPRESS ]   TMEM161A [ SEEK ]   TMEM161A [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM161A [ Firebrowse - Broad ]
GenevisibleExpression of TMEM161A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54929
GTEX Portal (Tissue expression)TMEM161A
Human Protein AtlasENSG00000064545-TMEM161A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NX61   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NX61  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NX61
PhosPhoSitePlusQ9NX61
Domains : Interpro (EBI)Transmembrane_161A/B   
Domain families : Pfam (Sanger)Tmemb_161AB (PF10268)   
Domain families : Pfam (NCBI)pfam10268   
Conserved Domain (NCBI)TMEM161A
SuperfamilyQ9NX61
AlphaFold pdb e-kbQ9NX61   
Human Protein Atlas [tissue]ENSG00000064545-TMEM161A [tissue]
HPRD07905
Protein Interaction databases
DIP (DOE-UCLA)Q9NX61
IntAct (EBI)Q9NX61
BioGRIDTMEM161A
STRING (EMBL)TMEM161A
ZODIACTMEM161A
Ontologies - Pathways
QuickGOQ9NX61
Ontology : AmiGOprotein binding  integral component of membrane  response to retinoic acid  cellular response to oxidative stress  cellular response to UV  positive regulation of DNA repair  negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage  
Ontology : EGO-EBIprotein binding  integral component of membrane  response to retinoic acid  cellular response to oxidative stress  cellular response to UV  positive regulation of DNA repair  negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage  
NDEx NetworkTMEM161A
Atlas of Cancer Signalling NetworkTMEM161A
Wikipedia pathwaysTMEM161A
Orthology - Evolution
OrthoDB54929
GeneTree (enSembl)ENSG00000064545
Phylogenetic Trees/Animal Genes : TreeFamTMEM161A
Homologs : HomoloGeneTMEM161A
Homology/Alignments : Family Browser (UCSC)TMEM161A
Gene fusions - Rearrangements
Fusion : QuiverTMEM161A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM161A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM161A
dbVarTMEM161A
ClinVarTMEM161A
MonarchTMEM161A
1000_GenomesTMEM161A 
Exome Variant ServerTMEM161A
GNOMAD BrowserENSG00000064545
Varsome BrowserTMEM161A
ACMGTMEM161A variants
VarityQ9NX61
Genomic Variants (DGV)TMEM161A [DGVbeta]
DECIPHERTMEM161A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM161A 
Mutations
ICGC Data PortalTMEM161A 
TCGA Data PortalTMEM161A 
Broad Tumor PortalTMEM161A
OASIS PortalTMEM161A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM161A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM161A
Mutations and Diseases : HGMDTMEM161A
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM161A
DgiDB (Drug Gene Interaction Database)TMEM161A
DoCM (Curated mutations)TMEM161A
CIViC (Clinical Interpretations of Variants in Cancer)TMEM161A
Cancer3DTMEM161A
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM618966   
Orphanet
DisGeNETTMEM161A
MedgenTMEM161A
Genetic Testing Registry TMEM161A
NextProtQ9NX61 [Medical]
GENETestsTMEM161A
Target ValidationTMEM161A
Huge Navigator TMEM161A [HugePedia]
ClinGenTMEM161A
Clinical trials, drugs, therapy
MyCancerGenomeTMEM161A
Protein Interactions : CTDTMEM161A
Pharm GKB GenePA145147959
PharosQ9NX61
Clinical trialTMEM161A
Miscellaneous
canSAR (ICR)TMEM161A
HarmonizomeTMEM161A
DataMed IndexTMEM161A
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM161A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:35:26 CEST 2021

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