TMEM161B (transmembrane protein 161B)

2014-11-01  

Identity

HGNC
TMEM161B
LOCATION
5q14.3
LOCUSID
153396
ALIAS
FLB3342,PRO1313
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 153396
HGNC: 28483
Ensembl: ENSG00000164180

Variants:

dbSNP: 153396
ClinVar: 153396
TCGA: ENSG00000164180
COSMIC: TMEM161B

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000164180ENST00000296595Q8NDZ6
ENSG00000164180ENST00000506536D6RAK4
ENSG00000164180ENST00000507872E9PFW6
ENSG00000164180ENST00000509387D6RBE8
ENSG00000164180ENST00000510089Q8NDZ6
ENSG00000164180ENST00000511087D6RAR3
ENSG00000164180ENST00000511218B7Z6A5
ENSG00000164180ENST00000512429B7Z6T3
ENSG00000164180ENST00000514135E9PCX5

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
274799092016Identification of 15 genetic loci associated with risk of major depression in individuals of European descent.170
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.85
206280862010Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.11
300066042018The major depressive disorder GWAS-supported variant rs10514299 in TMEM161B-MEF2C predicts putamen activation during reward processing in alcohol dependence.1

Citation

Dessen P

TMEM161B (transmembrane protein 161B)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74823/tmem161b