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TMEM164 (transmembrane protein 164)

Identity

Alias (NCBI)bB360B22.3
HGNC (Hugo) TMEM164
HGNC Alias symbFLJ22679
RP13-360B22.2
LocusID (NCBI) 84187
Atlas_Id 74826
Location Xq23  [Link to chromosome band Xq23]
Location_base_pair Starts at 110003114 and ends at 110177788 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EFHC1 (6p12.2) / TMEM164 (Xq23)TMEM164 (Xq23) / HSP90AB1 (6p21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM164   26217
Cards
Entrez_Gene (NCBI)TMEM164    transmembrane protein 164
AliasesbB360B22.3
GeneCards (Weizmann)TMEM164
Ensembl hg19 (Hinxton)ENSG00000157600 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000157600 [Gene_View]  ENSG00000157600 [Sequence]  chrX:110003114-110177788 [Contig_View]  TMEM164 [Vega]
ICGC DataPortalENSG00000157600
TCGA cBioPortalTMEM164
AceView (NCBI)TMEM164
Genatlas (Paris)TMEM164
SOURCE (Princeton)TMEM164
Genetics Home Reference (NIH)TMEM164
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM164  -     chrX:110003114-110177788 +  Xq23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM164  -     Xq23   [Description]    (hg19-Feb_2009)
GoldenPathTMEM164 - Xq23 [CytoView hg19]  TMEM164 - Xq23 [CytoView hg38]
ImmunoBaseENSG00000157600
Genome Data Viewer NCBITMEM164 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK000180 AK026332 AK057084 AK094127 BC002716
RefSeq transcript (Entrez)NM_001353849 NM_001353850 NM_001353851 NM_017698 NM_032227
Consensus coding sequences : CCDS (NCBI)TMEM164
Gene ExpressionTMEM164 [ NCBI-GEO ]   TMEM164 [ EBI - ARRAY_EXPRESS ]   TMEM164 [ SEEK ]   TMEM164 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM164 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM164 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84187
GTEX Portal (Tissue expression)TMEM164
Human Protein AtlasENSG00000157600-TMEM164 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5U3C3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5U3C3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5U3C3
PhosPhoSitePlusQ5U3C3
Domains : Interpro (EBI)TMEM164   
Domain families : Pfam (Sanger)TMEM164 (PF14808)   
Domain families : Pfam (NCBI)pfam14808   
Conserved Domain (NCBI)TMEM164
SuperfamilyQ5U3C3
AlphaFold pdb e-kbQ5U3C3   
Human Protein Atlas [tissue]ENSG00000157600-TMEM164 [tissue]
HPRD06539
Protein Interaction databases
DIP (DOE-UCLA)Q5U3C3
IntAct (EBI)Q5U3C3
BioGRIDTMEM164
STRING (EMBL)TMEM164
ZODIACTMEM164
Ontologies - Pathways
QuickGOQ5U3C3
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM164
Atlas of Cancer Signalling NetworkTMEM164
Wikipedia pathwaysTMEM164
Orthology - Evolution
OrthoDB84187
GeneTree (enSembl)ENSG00000157600
Phylogenetic Trees/Animal Genes : TreeFamTMEM164
Homologs : HomoloGeneTMEM164
Homology/Alignments : Family Browser (UCSC)TMEM164
Gene fusions - Rearrangements
Fusion : QuiverTMEM164
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM164 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM164
dbVarTMEM164
ClinVarTMEM164
MonarchTMEM164
1000_GenomesTMEM164 
Exome Variant ServerTMEM164
GNOMAD BrowserENSG00000157600
Varsome BrowserTMEM164
ACMGTMEM164 variants
VarityQ5U3C3
Genomic Variants (DGV)TMEM164 [DGVbeta]
DECIPHERTMEM164 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM164 
Mutations
ICGC Data PortalTMEM164 
TCGA Data PortalTMEM164 
Broad Tumor PortalTMEM164
OASIS PortalTMEM164 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM164  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM164
Mutations and Diseases : HGMDTMEM164
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM164
DgiDB (Drug Gene Interaction Database)TMEM164
DoCM (Curated mutations)TMEM164
CIViC (Clinical Interpretations of Variants in Cancer)TMEM164
Cancer3DTMEM164
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM164
MedgenTMEM164
Genetic Testing Registry TMEM164
NextProtQ5U3C3 [Medical]
GENETestsTMEM164
Target ValidationTMEM164
Huge Navigator TMEM164 [HugePedia]
ClinGenTMEM164
Clinical trials, drugs, therapy
MyCancerGenomeTMEM164
Protein Interactions : CTDTMEM164
Pharm GKB GenePA145148045
PharosQ5U3C3
Clinical trialTMEM164
Miscellaneous
canSAR (ICR)TMEM164
HarmonizomeTMEM164
DataMed IndexTMEM164
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM164
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:53 CEST 2021

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