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TMEM168 (transmembrane protein 168)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM168
HGNC Alias symbDKFZp564C012
FLJ13576
LocusID (NCBI) 64418
Atlas_Id 74830
Location 7q31.1  [Link to chromosome band 7q31]
Location_base_pair Starts at 112762379 and ends at 112790393 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SYPL1 (7q22.3) / TMEM168 (7q31.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM168   25826
Cards
Entrez_Gene (NCBI)TMEM168    transmembrane protein 168
Aliases
GeneCards (Weizmann)TMEM168
Ensembl hg19 (Hinxton)ENSG00000146802 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146802 [Gene_View]  ENSG00000146802 [Sequence]  chr7:112762379-112790393 [Contig_View]  TMEM168 [Vega]
ICGC DataPortalENSG00000146802
TCGA cBioPortalTMEM168
AceView (NCBI)TMEM168
Genatlas (Paris)TMEM168
SOURCE (Princeton)TMEM168
Genetics Home Reference (NIH)TMEM168
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM168  -     chr7:112762379-112790393 -  7q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM168  -     7q31.1   [Description]    (hg19-Feb_2009)
GoldenPathTMEM168 - 7q31.1 [CytoView hg19]  TMEM168 - 7q31.1 [CytoView hg38]
ImmunoBaseENSG00000146802
Genome Data Viewer NCBITMEM168 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI698728 AK023638 AK025482 AK293311 AK314460
RefSeq transcript (Entrez)NM_001287497 NM_022484
Consensus coding sequences : CCDS (NCBI)TMEM168
Gene ExpressionTMEM168 [ NCBI-GEO ]   TMEM168 [ EBI - ARRAY_EXPRESS ]   TMEM168 [ SEEK ]   TMEM168 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM168 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM168 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64418
GTEX Portal (Tissue expression)TMEM168
Human Protein AtlasENSG00000146802-TMEM168 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H0V1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H0V1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H0V1
PhosPhoSitePlusQ9H0V1
Domains : Interpro (EBI)TMEM168   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM168
SuperfamilyQ9H0V1
AlphaFold pdb e-kbQ9H0V1   
Human Protein Atlas [tissue]ENSG00000146802-TMEM168 [tissue]
HPRD07831
Protein Interaction databases
DIP (DOE-UCLA)Q9H0V1
IntAct (EBI)Q9H0V1
BioGRIDTMEM168
STRING (EMBL)TMEM168
ZODIACTMEM168
Ontologies - Pathways
QuickGOQ9H0V1
Ontology : AmiGOintegral component of membrane  transport vesicle  
Ontology : EGO-EBIintegral component of membrane  transport vesicle  
NDEx NetworkTMEM168
Atlas of Cancer Signalling NetworkTMEM168
Wikipedia pathwaysTMEM168
Orthology - Evolution
OrthoDB64418
GeneTree (enSembl)ENSG00000146802
Phylogenetic Trees/Animal Genes : TreeFamTMEM168
Homologs : HomoloGeneTMEM168
Homology/Alignments : Family Browser (UCSC)TMEM168
Gene fusions - Rearrangements
Fusion : QuiverTMEM168
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM168 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM168
dbVarTMEM168
ClinVarTMEM168
MonarchTMEM168
1000_GenomesTMEM168 
Exome Variant ServerTMEM168
GNOMAD BrowserENSG00000146802
Varsome BrowserTMEM168
ACMGTMEM168 variants
VarityQ9H0V1
Genomic Variants (DGV)TMEM168 [DGVbeta]
DECIPHERTMEM168 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM168 
Mutations
ICGC Data PortalTMEM168 
TCGA Data PortalTMEM168 
Broad Tumor PortalTMEM168
OASIS PortalTMEM168 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM168  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM168
Mutations and Diseases : HGMDTMEM168
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM168
DgiDB (Drug Gene Interaction Database)TMEM168
DoCM (Curated mutations)TMEM168
CIViC (Clinical Interpretations of Variants in Cancer)TMEM168
Cancer3DTMEM168
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM168
MedgenTMEM168
Genetic Testing Registry TMEM168
NextProtQ9H0V1 [Medical]
GENETestsTMEM168
Target ValidationTMEM168
Huge Navigator TMEM168 [HugePedia]
ClinGenTMEM168
Clinical trials, drugs, therapy
MyCancerGenomeTMEM168
Protein Interactions : CTDTMEM168
Pharm GKB GenePA147357253
PharosQ9H0V1
Clinical trialTMEM168
Miscellaneous
canSAR (ICR)TMEM168
HarmonizomeTMEM168
DataMed IndexTMEM168
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM168
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:53 CEST 2021

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