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TMEM169 (transmembrane protein 169)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM169
HGNC Alias symbFLJ34263
LocusID (NCBI) 92691
Atlas_Id 74831
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 216081919 and ends at 216102783 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM169   25130
Cards
Entrez_Gene (NCBI)TMEM169    transmembrane protein 169
Aliases
GeneCards (Weizmann)TMEM169
Ensembl hg19 (Hinxton)ENSG00000163449 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163449 [Gene_View]  ENSG00000163449 [Sequence]  chr2:216081919-216102783 [Contig_View]  TMEM169 [Vega]
ICGC DataPortalENSG00000163449
TCGA cBioPortalTMEM169
AceView (NCBI)TMEM169
Genatlas (Paris)TMEM169
SOURCE (Princeton)TMEM169
Genetics Home Reference (NIH)TMEM169
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM169  -     chr2:216081919-216102783 +  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM169  -     2q35   [Description]    (hg19-Feb_2009)
GoldenPathTMEM169 - 2q35 [CytoView hg19]  TMEM169 - 2q35 [CytoView hg38]
ImmunoBaseENSG00000163449
Genome Data Viewer NCBITMEM169 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK091582 AK172731 AK313536 AW291087 BC008604
RefSeq transcript (Entrez)NM_001142310 NM_001142311 NM_001142312 NM_138390
Consensus coding sequences : CCDS (NCBI)TMEM169
Gene ExpressionTMEM169 [ NCBI-GEO ]   TMEM169 [ EBI - ARRAY_EXPRESS ]   TMEM169 [ SEEK ]   TMEM169 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM169 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM169 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)92691
GTEX Portal (Tissue expression)TMEM169
Human Protein AtlasENSG00000163449-TMEM169 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96HH4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96HH4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96HH4
PhosPhoSitePlusQ96HH4
Domains : Interpro (EBI)TMEM169   
Domain families : Pfam (Sanger)TMEM169 (PF15052)   
Domain families : Pfam (NCBI)pfam15052   
Conserved Domain (NCBI)TMEM169
SuperfamilyQ96HH4
AlphaFold pdb e-kbQ96HH4   
Human Protein Atlas [tissue]ENSG00000163449-TMEM169 [tissue]
HPRD14293
Protein Interaction databases
DIP (DOE-UCLA)Q96HH4
IntAct (EBI)Q96HH4
BioGRIDTMEM169
STRING (EMBL)TMEM169
ZODIACTMEM169
Ontologies - Pathways
QuickGOQ96HH4
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM169
Atlas of Cancer Signalling NetworkTMEM169
Wikipedia pathwaysTMEM169
Orthology - Evolution
OrthoDB92691
GeneTree (enSembl)ENSG00000163449
Phylogenetic Trees/Animal Genes : TreeFamTMEM169
Homologs : HomoloGeneTMEM169
Homology/Alignments : Family Browser (UCSC)TMEM169
Gene fusions - Rearrangements
Fusion : QuiverTMEM169
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM169 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM169
dbVarTMEM169
ClinVarTMEM169
MonarchTMEM169
1000_GenomesTMEM169 
Exome Variant ServerTMEM169
GNOMAD BrowserENSG00000163449
Varsome BrowserTMEM169
ACMGTMEM169 variants
VarityQ96HH4
Genomic Variants (DGV)TMEM169 [DGVbeta]
DECIPHERTMEM169 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM169 
Mutations
ICGC Data PortalTMEM169 
TCGA Data PortalTMEM169 
Broad Tumor PortalTMEM169
OASIS PortalTMEM169 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM169  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM169
Mutations and Diseases : HGMDTMEM169
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM169
DgiDB (Drug Gene Interaction Database)TMEM169
DoCM (Curated mutations)TMEM169
CIViC (Clinical Interpretations of Variants in Cancer)TMEM169
Cancer3DTMEM169
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM169
MedgenTMEM169
Genetic Testing Registry TMEM169
NextProtQ96HH4 [Medical]
GENETestsTMEM169
Target ValidationTMEM169
Huge Navigator TMEM169 [HugePedia]
ClinGenTMEM169
Clinical trials, drugs, therapy
MyCancerGenomeTMEM169
Protein Interactions : CTDTMEM169
Pharm GKB GenePA162405911
PharosQ96HH4
Clinical trialTMEM169
Miscellaneous
canSAR (ICR)TMEM169
HarmonizomeTMEM169
DataMed IndexTMEM169
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM169
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:53 CEST 2021

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