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TMEM174 (transmembrane protein 174)

Identity

Alias_symbol (synonym)MGC13034
FLJ31268
Other alias-
HGNC (Hugo) TMEM174
LocusID (NCBI) 134288
Atlas_Id 74836
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 73173196 and ends at 73175143 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM174   28187
Cards
Entrez_Gene (NCBI)TMEM174  134288  transmembrane protein 174
Aliases
GeneCards (Weizmann)TMEM174
Ensembl hg19 (Hinxton)ENSG00000164325 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164325 [Gene_View]  chr5:73173196-73175143 [Contig_View]  TMEM174 [Vega]
ICGC DataPortalENSG00000164325
TCGA cBioPortalTMEM174
AceView (NCBI)TMEM174
Genatlas (Paris)TMEM174
WikiGenes134288
SOURCE (Princeton)TMEM174
Genetics Home Reference (NIH)TMEM174
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM174  -     chr5:73173196-73175143 +  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM174  -     5q13.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM174 - 5q13.2 [CytoView hg19]  TMEM174 - 5q13.2 [CytoView hg38]
Mapping of homologs : NCBITMEM174 [Mapview hg19]  TMEM174 [Mapview hg38]
OMIM614909   
Gene and transcription
Genbank (Entrez)AK055830 AK315460 BC019346 JF432630
RefSeq transcript (Entrez)NM_153217
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM174
Cluster EST : UnigeneHs.508588 [ NCBI ]
CGAP (NCI)Hs.508588
Alternative Splicing GalleryENSG00000164325
Gene ExpressionTMEM174 [ NCBI-GEO ]   TMEM174 [ EBI - ARRAY_EXPRESS ]   TMEM174 [ SEEK ]   TMEM174 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM174 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)134288
GTEX Portal (Tissue expression)TMEM174
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WUU8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WUU8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WUU8
Splice isoforms : SwissVarQ8WUU8
PhosPhoSitePlusQ8WUU8
Domains : Interpro (EBI)TMEM174   
Domain families : Pfam (Sanger)TMEM174 (PF15029)   
Domain families : Pfam (NCBI)pfam15029   
Conserved Domain (NCBI)TMEM174
DMDM Disease mutations134288
Blocks (Seattle)TMEM174
SuperfamilyQ8WUU8
Human Protein AtlasENSG00000164325
Peptide AtlasQ8WUU8
HPRD14432
IPIIPI00154766   IPI00844254   
Protein Interaction databases
DIP (DOE-UCLA)Q8WUU8
IntAct (EBI)Q8WUU8
FunCoupENSG00000164325
BioGRIDTMEM174
STRING (EMBL)TMEM174
ZODIACTMEM174
Ontologies - Pathways
QuickGOQ8WUU8
Ontology : AmiGOprotein binding  endoplasmic reticulum membrane  integral component of membrane  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum membrane  integral component of membrane  
NDEx NetworkTMEM174
Atlas of Cancer Signalling NetworkTMEM174
Wikipedia pathwaysTMEM174
Orthology - Evolution
OrthoDB134288
GeneTree (enSembl)ENSG00000164325
Phylogenetic Trees/Animal Genes : TreeFamTMEM174
HOVERGENQ8WUU8
HOGENOMQ8WUU8
Homologs : HomoloGeneTMEM174
Homology/Alignments : Family Browser (UCSC)TMEM174
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM174 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM174
dbVarTMEM174
ClinVarTMEM174
1000_GenomesTMEM174 
Exome Variant ServerTMEM174
ExAC (Exome Aggregation Consortium)TMEM174 (select the gene name)
Genetic variants : HAPMAP134288
Genomic Variants (DGV)TMEM174 [DGVbeta]
DECIPHERTMEM174 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM174 
Mutations
ICGC Data PortalTMEM174 
TCGA Data PortalTMEM174 
Broad Tumor PortalTMEM174
OASIS PortalTMEM174 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM174  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM174
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM174
DgiDB (Drug Gene Interaction Database)TMEM174
DoCM (Curated mutations)TMEM174 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM174 (select a term)
intoGenTMEM174
Cancer3DTMEM174(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614909   
Orphanet
MedgenTMEM174
Genetic Testing Registry TMEM174
NextProtQ8WUU8 [Medical]
TSGene134288
GENETestsTMEM174
Target ValidationTMEM174
Huge Navigator TMEM174 [HugePedia]
snp3D : Map Gene to Disease134288
BioCentury BCIQTMEM174
ClinGenTMEM174
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD134288
Chemical/Pharm GKB GenePA162405935
Clinical trialTMEM174
Miscellaneous
canSAR (ICR)TMEM174 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM174
EVEXTMEM174
GoPubMedTMEM174
iHOPTMEM174
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:46:00 CEST 2017

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