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TMEM183B (transmembrane protein 183B)

Identity

Alias_symbol (synonym)C1orf37-DUP
Other aliasC1ORF37DUP
HGNC (Hugo) TMEM183B
LocusID (NCBI) 653659
Atlas_Id 74847
Location 3q25.1  [Link to chromosome band 3q25]
Location_base_pair Starts at 149981676 and ends at 149983366 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM183B   33205
Cards
Entrez_Gene (NCBI)TMEM183B  653659  transmembrane protein 183B
AliasesC1ORF37DUP; C1orf37-DUP
GeneCards (Weizmann)TMEM183B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:149981676-149983366 [Contig_View]  TMEM183B [Vega]
TCGA cBioPortalTMEM183B
AceView (NCBI)TMEM183B
Genatlas (Paris)TMEM183B
WikiGenes653659
SOURCE (Princeton)TMEM183B
Genetics Home Reference (NIH)TMEM183B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM183B  -     chr3:149981676-149983366 -  3q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM183B  -     3q25.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM183B - 3q25.1 [CytoView hg19]  TMEM183B - 3q25.1 [CytoView hg38]
Mapping of homologs : NCBITMEM183B [Mapview hg19]  TMEM183B [Mapview hg38]
OMIM611365   
Gene and transcription
Genbank (Entrez)AK297222
RefSeq transcript (Entrez)NM_001079809
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM183B
Cluster EST : UnigeneHs.652908 [ NCBI ]
CGAP (NCI)Hs.652908
Gene ExpressionTMEM183B [ NCBI-GEO ]   TMEM183B [ EBI - ARRAY_EXPRESS ]   TMEM183B [ SEEK ]   TMEM183B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM183B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653659
GTEX Portal (Tissue expression)TMEM183B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ1AE95   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ1AE95  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ1AE95
Splice isoforms : SwissVarQ1AE95
PhosPhoSitePlusQ1AE95
Domains : Interpro (EBI)F-box_dom    TMEM183   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM183B
DMDM Disease mutations653659
Blocks (Seattle)TMEM183B
SuperfamilyQ1AE95
Peptide AtlasQ1AE95
IPIIPI00176652   
Protein Interaction databases
DIP (DOE-UCLA)Q1AE95
IntAct (EBI)Q1AE95
BioGRIDTMEM183B
STRING (EMBL)TMEM183B
ZODIACTMEM183B
Ontologies - Pathways
QuickGOQ1AE95
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM183B
Atlas of Cancer Signalling NetworkTMEM183B
Wikipedia pathwaysTMEM183B
Orthology - Evolution
OrthoDB653659
Phylogenetic Trees/Animal Genes : TreeFamTMEM183B
HOVERGENQ1AE95
HOGENOMQ1AE95
Homologs : HomoloGeneTMEM183B
Homology/Alignments : Family Browser (UCSC)TMEM183B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM183B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM183B
dbVarTMEM183B
ClinVarTMEM183B
1000_GenomesTMEM183B 
Exome Variant ServerTMEM183B
ExAC (Exome Aggregation Consortium)TMEM183B (select the gene name)
Genetic variants : HAPMAP653659
Genomic Variants (DGV)TMEM183B [DGVbeta]
DECIPHERTMEM183B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM183B 
Mutations
ICGC Data PortalTMEM183B 
TCGA Data PortalTMEM183B 
Broad Tumor PortalTMEM183B
OASIS PortalTMEM183B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM183B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM183B
DgiDB (Drug Gene Interaction Database)TMEM183B
DoCM (Curated mutations)TMEM183B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM183B (select a term)
intoGenTMEM183B
Cancer3DTMEM183B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611365   
Orphanet
MedgenTMEM183B
Genetic Testing Registry TMEM183B
NextProtQ1AE95 [Medical]
TSGene653659
GENETestsTMEM183B
Target ValidationTMEM183B
Huge Navigator TMEM183B [HugePedia]
snp3D : Map Gene to Disease653659
BioCentury BCIQTMEM183B
ClinGenTMEM183B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653659
Chemical/Pharm GKB GenePA162406111
Clinical trialTMEM183B
Miscellaneous
canSAR (ICR)TMEM183B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM183B
EVEXTMEM183B
GoPubMedTMEM183B
iHOPTMEM183B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:47 CEST 2017

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