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TMEM184A (transmembrane protein 184A)

Identity

Alias_symbol (synonym)MGC9712
SDMG1
Other alias
HGNC (Hugo) TMEM184A
LocusID (NCBI) 202915
Atlas_Id 74848
Location 7p22.3  [Link to chromosome band 7p22]
Location_base_pair Starts at 1542235 and ends at 1556430 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM184A (7p22.3) / TMEM184A (7p22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM184A   28797
Cards
Entrez_Gene (NCBI)TMEM184A  202915  transmembrane protein 184A
AliasesSDMG1
GeneCards (Weizmann)TMEM184A
Ensembl hg19 (Hinxton)ENSG00000164855 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164855 [Gene_View]  chr7:1542235-1556430 [Contig_View]  TMEM184A [Vega]
ICGC DataPortalENSG00000164855
TCGA cBioPortalTMEM184A
AceView (NCBI)TMEM184A
Genatlas (Paris)TMEM184A
WikiGenes202915
SOURCE (Princeton)TMEM184A
Genetics Home Reference (NIH)TMEM184A
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM184A  -     chr7:1542235-1556430 -  7p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM184A  -     7p22.3   [Description]    (hg19-Feb_2009)
EnsemblTMEM184A - 7p22.3 [CytoView hg19]  TMEM184A - 7p22.3 [CytoView hg38]
Mapping of homologs : NCBITMEM184A [Mapview hg19]  TMEM184A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK075043 AK096790 AK096817 AK126312 AK172850
RefSeq transcript (Entrez)NM_001097620 NM_152689
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM184A
Cluster EST : UnigeneHs.707784 [ NCBI ]
CGAP (NCI)Hs.707784
Alternative Splicing GalleryENSG00000164855
Gene ExpressionTMEM184A [ NCBI-GEO ]   TMEM184A [ EBI - ARRAY_EXPRESS ]   TMEM184A [ SEEK ]   TMEM184A [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM184A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)202915
GTEX Portal (Tissue expression)TMEM184A
Human Protein AtlasENSG00000164855-TMEM184A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZMB5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZMB5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZMB5
Splice isoforms : SwissVarQ6ZMB5
PhosPhoSitePlusQ6ZMB5
Domains : Interpro (EBI)Ostalpha/TMEM184C   
Domain families : Pfam (Sanger)Solute_trans_a (PF03619)   
Domain families : Pfam (NCBI)pfam03619   
Conserved Domain (NCBI)TMEM184A
DMDM Disease mutations202915
Blocks (Seattle)TMEM184A
SuperfamilyQ6ZMB5
Human Protein Atlas [tissue]ENSG00000164855-TMEM184A [tissue]
Peptide AtlasQ6ZMB5
HPRD14716
IPIIPI00163431   IPI00894259   IPI00892577   IPI00892950   IPI00893319   IPI00892700   IPI00893060   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZMB5
IntAct (EBI)Q6ZMB5
FunCoupENSG00000164855
BioGRIDTMEM184A
STRING (EMBL)TMEM184A
ZODIACTMEM184A
Ontologies - Pathways
QuickGOQ6ZMB5
Ontology : AmiGOtransporter activity  endosome  plasma membrane  transport  heparin binding  integral component of membrane  transport vesicle membrane  cytoplasmic vesicle membrane  secretory granule membrane  early endosome membrane  early endosome membrane  perinuclear region of cytoplasm  
Ontology : EGO-EBItransporter activity  endosome  plasma membrane  transport  heparin binding  integral component of membrane  transport vesicle membrane  cytoplasmic vesicle membrane  secretory granule membrane  early endosome membrane  early endosome membrane  perinuclear region of cytoplasm  
NDEx NetworkTMEM184A
Atlas of Cancer Signalling NetworkTMEM184A
Wikipedia pathwaysTMEM184A
Orthology - Evolution
OrthoDB202915
GeneTree (enSembl)ENSG00000164855
Phylogenetic Trees/Animal Genes : TreeFamTMEM184A
HOVERGENQ6ZMB5
HOGENOMQ6ZMB5
Homologs : HomoloGeneTMEM184A
Homology/Alignments : Family Browser (UCSC)TMEM184A
Gene fusions - Rearrangements
Fusion: Tumor Portal TMEM184A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM184A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM184A
dbVarTMEM184A
ClinVarTMEM184A
1000_GenomesTMEM184A 
Exome Variant ServerTMEM184A
ExAC (Exome Aggregation Consortium)ENSG00000164855
GNOMAD BrowserENSG00000164855
Genetic variants : HAPMAP202915
Genomic Variants (DGV)TMEM184A [DGVbeta]
DECIPHERTMEM184A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM184A 
Mutations
ICGC Data PortalTMEM184A 
TCGA Data PortalTMEM184A 
Broad Tumor PortalTMEM184A
OASIS PortalTMEM184A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM184A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM184A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM184A
DgiDB (Drug Gene Interaction Database)TMEM184A
DoCM (Curated mutations)TMEM184A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM184A (select a term)
intoGenTMEM184A
Cancer3DTMEM184A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM184A
Genetic Testing Registry TMEM184A
NextProtQ6ZMB5 [Medical]
TSGene202915
GENETestsTMEM184A
Target ValidationTMEM184A
Huge Navigator TMEM184A [HugePedia]
snp3D : Map Gene to Disease202915
BioCentury BCIQTMEM184A
ClinGenTMEM184A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD202915
Chemical/Pharm GKB GenePA162406118
Clinical trialTMEM184A
Miscellaneous
canSAR (ICR)TMEM184A (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM184A
EVEXTMEM184A
GoPubMedTMEM184A
iHOPTMEM184A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:32:53 CET 2017

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