Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMEM184C (transmembrane protein 184C)

Identity

Alias (NCBI)TMEM34
HGNC (Hugo) TMEM184C
HGNC Alias symbFLJ10846
HGNC Previous nameTMEM34
HGNC Previous nametransmembrane protein 34
LocusID (NCBI) 55751
Atlas_Id 47716
Location 4q31.23  [Link to chromosome band 4q31]
Location_base_pair Starts at 147617397 and ends at 147636721 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ARHGAP10 (4q31.23) / TMEM184C (4q31.23)NUDCD1 (8q23.1) / TMEM184C (4q31.23)TMEM184C (4q31.23) / ARHGAP10 (4q31.23)
TMEM184C (4q31.23) / GDE1 (16p12.3)ARHGAP10 4q31.23 / TMEM184C 4q31.23NUDCD1 8q23.1 / TMEM184C 4q31.23

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM184C   25587
Cards
Entrez_Gene (NCBI)TMEM184C    transmembrane protein 184C
AliasesTMEM34
GeneCards (Weizmann)TMEM184C
Ensembl hg19 (Hinxton)ENSG00000164168 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164168 [Gene_View]  ENSG00000164168 [Sequence]  chr4:147617397-147636721 [Contig_View]  TMEM184C [Vega]
ICGC DataPortalENSG00000164168
TCGA cBioPortalTMEM184C
AceView (NCBI)TMEM184C
Genatlas (Paris)TMEM184C
SOURCE (Princeton)TMEM184C
Genetics Home Reference (NIH)TMEM184C
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM184C  -     chr4:147617397-147636721 +  4q31.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM184C  -     4q31.23   [Description]    (hg19-Feb_2009)
GoldenPathTMEM184C - 4q31.23 [CytoView hg19]  TMEM184C - 4q31.23 [CytoView hg38]
ImmunoBaseENSG00000164168
Genome Data Viewer NCBITMEM184C [Mapview hg19]  
OMIM613937   
Gene and transcription
Genbank (Entrez)AF305823 AK000169 AK001708 BC008120 BC046128
RefSeq transcript (Entrez)NM_018241
Consensus coding sequences : CCDS (NCBI)TMEM184C
Gene ExpressionTMEM184C [ NCBI-GEO ]   TMEM184C [ EBI - ARRAY_EXPRESS ]   TMEM184C [ SEEK ]   TMEM184C [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM184C [ Firebrowse - Broad ]
GenevisibleExpression of TMEM184C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55751
GTEX Portal (Tissue expression)TMEM184C
Human Protein AtlasENSG00000164168-TMEM184C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NVA4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NVA4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NVA4
PhosPhoSitePlusQ9NVA4
Domains : Interpro (EBI)Ostalpha/TMEM184C   
Domain families : Pfam (Sanger)Solute_trans_a (PF03619)   
Domain families : Pfam (NCBI)pfam03619   
Conserved Domain (NCBI)TMEM184C
SuperfamilyQ9NVA4
AlphaFold pdb e-kbQ9NVA4   
Human Protein Atlas [tissue]ENSG00000164168-TMEM184C [tissue]
HPRD07702
Protein Interaction databases
DIP (DOE-UCLA)Q9NVA4
IntAct (EBI)Q9NVA4
BioGRIDTMEM184C
STRING (EMBL)TMEM184C
ZODIACTMEM184C
Ontologies - Pathways
QuickGOQ9NVA4
Ontology : AmiGOtransporter activity  transport  integral component of membrane  
Ontology : EGO-EBItransporter activity  transport  integral component of membrane  
NDEx NetworkTMEM184C
Atlas of Cancer Signalling NetworkTMEM184C
Wikipedia pathwaysTMEM184C
Orthology - Evolution
OrthoDB55751
GeneTree (enSembl)ENSG00000164168
Phylogenetic Trees/Animal Genes : TreeFamTMEM184C
Homologs : HomoloGeneTMEM184C
Homology/Alignments : Family Browser (UCSC)TMEM184C
Gene fusions - Rearrangements
Fusion : MitelmanARHGAP10/TMEM184C [4q31.23/4q31.23]  
Fusion : MitelmanNUDCD1/TMEM184C [8q23.1/4q31.23]  
Fusion : QuiverTMEM184C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM184C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM184C
dbVarTMEM184C
ClinVarTMEM184C
MonarchTMEM184C
1000_GenomesTMEM184C 
Exome Variant ServerTMEM184C
GNOMAD BrowserENSG00000164168
Varsome BrowserTMEM184C
ACMGTMEM184C variants
VarityQ9NVA4
Genomic Variants (DGV)TMEM184C [DGVbeta]
DECIPHERTMEM184C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM184C 
Mutations
ICGC Data PortalTMEM184C 
TCGA Data PortalTMEM184C 
Broad Tumor PortalTMEM184C
OASIS PortalTMEM184C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM184C  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM184C
Mutations and Diseases : HGMDTMEM184C
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM184C
DgiDB (Drug Gene Interaction Database)TMEM184C
DoCM (Curated mutations)TMEM184C
CIViC (Clinical Interpretations of Variants in Cancer)TMEM184C
Cancer3DTMEM184C
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613937   
Orphanet
DisGeNETTMEM184C
MedgenTMEM184C
Genetic Testing Registry TMEM184C
NextProtQ9NVA4 [Medical]
GENETestsTMEM184C
Target ValidationTMEM184C
Huge Navigator TMEM184C [HugePedia]
ClinGenTMEM184C
Clinical trials, drugs, therapy
MyCancerGenomeTMEM184C
Protein Interactions : CTDTMEM184C
Pharm GKB GenePA162406163
PharosQ9NVA4
Clinical trialTMEM184C
Miscellaneous
canSAR (ICR)TMEM184C
HarmonizomeTMEM184C
DataMed IndexTMEM184C
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM184C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:35:28 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.