Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMEM185A (transmembrane protein 185A)

Identity

Alias (NCBI)CXorf13
FAM11A
FRAXF
ee3
HGNC (Hugo) TMEM185A
HGNC Alias symbFRAXF
HGNC Previous nameCXorf13
 FAM11A
HGNC Previous namechromosome X open reading frame 13
 family with sequence similarity 11, member A
LocusID (NCBI) 84548
Atlas_Id 74850
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 149596556 and ends at 149631792 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM185A (Xq28) / APRT (16q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM185A   17125
Cards
Entrez_Gene (NCBI)TMEM185A    transmembrane protein 185A
AliasesCXorf13; FAM11A; FRAXF; ee3
GeneCards (Weizmann)TMEM185A
Ensembl hg19 (Hinxton)ENSG00000269556 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000269556 [Gene_View]  ENSG00000269556 [Sequence]  chrX:149596556-149631792 [Contig_View]  TMEM185A [Vega]
ICGC DataPortalENSG00000269556
TCGA cBioPortalTMEM185A
AceView (NCBI)TMEM185A
Genatlas (Paris)TMEM185A
SOURCE (Princeton)TMEM185A
Genetics Home Reference (NIH)TMEM185A
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM185A  -     chrX:149596556-149631792 -  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM185A  -     Xq28   [Description]    (hg19-Feb_2009)
GoldenPathTMEM185A - Xq28 [CytoView hg19]  TMEM185A - Xq28 [CytoView hg38]
ImmunoBaseENSG00000269556
Genome Data Viewer NCBITMEM185A [Mapview hg19]  
OMIM300031   
Gene and transcription
Genbank (Entrez)AF353675 AF530473 AK096308 AK097391 AK128688
RefSeq transcript (Entrez)NM_001174092 NM_001282302 NM_032508
Consensus coding sequences : CCDS (NCBI)TMEM185A
Gene ExpressionTMEM185A [ NCBI-GEO ]   TMEM185A [ EBI - ARRAY_EXPRESS ]   TMEM185A [ SEEK ]   TMEM185A [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM185A [ Firebrowse - Broad ]
GenevisibleExpression of TMEM185A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84548
GTEX Portal (Tissue expression)TMEM185A
Human Protein AtlasENSG00000269556-TMEM185A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NFB2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NFB2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NFB2
PhosPhoSitePlusQ8NFB2
Domains : Interpro (EBI)TM_Fragile-X-F-assoc   
Domain families : Pfam (Sanger)Tmemb_185A (PF10269)   
Domain families : Pfam (NCBI)pfam10269   
Conserved Domain (NCBI)TMEM185A
SuperfamilyQ8NFB2
AlphaFold pdb e-kbQ8NFB2   
Human Protein Atlas [tissue]ENSG00000269556-TMEM185A [tissue]
HPRD06504
Protein Interaction databases
DIP (DOE-UCLA)Q8NFB2
IntAct (EBI)Q8NFB2
BioGRIDTMEM185A
STRING (EMBL)TMEM185A
ZODIACTMEM185A
Ontologies - Pathways
QuickGOQ8NFB2
Ontology : AmiGOprotein binding  integral component of membrane  dendrite  dendrite  
Ontology : EGO-EBIprotein binding  integral component of membrane  dendrite  dendrite  
NDEx NetworkTMEM185A
Atlas of Cancer Signalling NetworkTMEM185A
Wikipedia pathwaysTMEM185A
Orthology - Evolution
OrthoDB84548
GeneTree (enSembl)ENSG00000269556
Phylogenetic Trees/Animal Genes : TreeFamTMEM185A
Homologs : HomoloGeneTMEM185A
Homology/Alignments : Family Browser (UCSC)TMEM185A
Gene fusions - Rearrangements
Fusion : QuiverTMEM185A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM185A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM185A
dbVarTMEM185A
ClinVarTMEM185A
MonarchTMEM185A
1000_GenomesTMEM185A 
Exome Variant ServerTMEM185A
GNOMAD BrowserENSG00000269556
Varsome BrowserTMEM185A
ACMGTMEM185A variants
VarityQ8NFB2
Genomic Variants (DGV)TMEM185A [DGVbeta]
DECIPHERTMEM185A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM185A 
Mutations
ICGC Data PortalTMEM185A 
TCGA Data PortalTMEM185A 
Broad Tumor PortalTMEM185A
OASIS PortalTMEM185A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM185A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM185A
Mutations and Diseases : HGMDTMEM185A
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM185A
DgiDB (Drug Gene Interaction Database)TMEM185A
DoCM (Curated mutations)TMEM185A
CIViC (Clinical Interpretations of Variants in Cancer)TMEM185A
Cancer3DTMEM185A
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300031   
Orphanet14685   
DisGeNETTMEM185A
MedgenTMEM185A
Genetic Testing Registry TMEM185A
NextProtQ8NFB2 [Medical]
GENETestsTMEM185A
Target ValidationTMEM185A
Huge Navigator TMEM185A [HugePedia]
ClinGenTMEM185A
Clinical trials, drugs, therapy
MyCancerGenomeTMEM185A
Protein Interactions : CTDTMEM185A
Pharm GKB GenePA27062
PharosQ8NFB2
Clinical trialTMEM185A
Miscellaneous
canSAR (ICR)TMEM185A
HarmonizomeTMEM185A
DataMed IndexTMEM185A
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM185A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:25:56 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.