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TMEM185B (transmembrane protein 185B)

Identity

Alias (NCBI)FAM11B
HGNC (Hugo) TMEM185B
HGNC Alias symbFLJ20979
HGNC Previous nameFAM11B
HGNC Previous namefamily with sequence similarity 11, member B
 transmembrane protein 185B (pseudogene)
LocusID (NCBI) 79134
Atlas_Id 74851
Location 2q14.2  [Link to chromosome band 2q14]
Location_base_pair Starts at 120217479 and ends at 120223400 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM185B (2q14.2) / SCRIB (8q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM185B   18896
Cards
Entrez_Gene (NCBI)TMEM185B    transmembrane protein 185B
AliasesFAM11B
GeneCards (Weizmann)TMEM185B
Ensembl hg19 (Hinxton)ENSG00000226479 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226479 [Gene_View]  ENSG00000226479 [Sequence]  chr2:120217479-120223400 [Contig_View]  TMEM185B [Vega]
ICGC DataPortalENSG00000226479
TCGA cBioPortalTMEM185B
AceView (NCBI)TMEM185B
Genatlas (Paris)TMEM185B
SOURCE (Princeton)TMEM185B
Genetics Home Reference (NIH)TMEM185B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM185B  -     chr2:120217479-120223400 -  2q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM185B  -     2q14.2   [Description]    (hg19-Feb_2009)
GoldenPathTMEM185B - 2q14.2 [CytoView hg19]  TMEM185B - 2q14.2 [CytoView hg38]
ImmunoBaseENSG00000226479
Genome Data Viewer NCBITMEM185B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF530474 AK021716 AK024632 AK090980 AK289880
RefSeq transcript (Entrez)NM_024121
Consensus coding sequences : CCDS (NCBI)TMEM185B
Gene ExpressionTMEM185B [ NCBI-GEO ]   TMEM185B [ EBI - ARRAY_EXPRESS ]   TMEM185B [ SEEK ]   TMEM185B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM185B [ Firebrowse - Broad ]
GenevisibleExpression of TMEM185B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79134
GTEX Portal (Tissue expression)TMEM185B
Human Protein AtlasENSG00000226479-TMEM185B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H7F4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H7F4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H7F4
PhosPhoSitePlusQ9H7F4
Domains : Interpro (EBI)TM_Fragile-X-F-assoc   
Domain families : Pfam (Sanger)Tmemb_185A (PF10269)   
Domain families : Pfam (NCBI)pfam10269   
Conserved Domain (NCBI)TMEM185B
SuperfamilyQ9H7F4
AlphaFold pdb e-kbQ9H7F4   
Human Protein Atlas [tissue]ENSG00000226479-TMEM185B [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9H7F4
IntAct (EBI)Q9H7F4
BioGRIDTMEM185B
STRING (EMBL)TMEM185B
ZODIACTMEM185B
Ontologies - Pathways
QuickGOQ9H7F4
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM185B
Atlas of Cancer Signalling NetworkTMEM185B
Wikipedia pathwaysTMEM185B
Orthology - Evolution
OrthoDB79134
GeneTree (enSembl)ENSG00000226479
Phylogenetic Trees/Animal Genes : TreeFamTMEM185B
Homologs : HomoloGeneTMEM185B
Homology/Alignments : Family Browser (UCSC)TMEM185B
Gene fusions - Rearrangements
Fusion : QuiverTMEM185B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM185B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM185B
dbVarTMEM185B
ClinVarTMEM185B
MonarchTMEM185B
1000_GenomesTMEM185B 
Exome Variant ServerTMEM185B
GNOMAD BrowserENSG00000226479
Varsome BrowserTMEM185B
ACMGTMEM185B variants
VarityQ9H7F4
Genomic Variants (DGV)TMEM185B [DGVbeta]
DECIPHERTMEM185B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM185B 
Mutations
ICGC Data PortalTMEM185B 
TCGA Data PortalTMEM185B 
Broad Tumor PortalTMEM185B
OASIS PortalTMEM185B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM185B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM185B
Mutations and Diseases : HGMDTMEM185B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM185B
DgiDB (Drug Gene Interaction Database)TMEM185B
DoCM (Curated mutations)TMEM185B
CIViC (Clinical Interpretations of Variants in Cancer)TMEM185B
Cancer3DTMEM185B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM185B
MedgenTMEM185B
Genetic Testing Registry TMEM185B
NextProtQ9H7F4 [Medical]
GENETestsTMEM185B
Target ValidationTMEM185B
Huge Navigator TMEM185B [HugePedia]
ClinGenTMEM185B
Clinical trials, drugs, therapy
MyCancerGenomeTMEM185B
Protein Interactions : CTDTMEM185B
Pharm GKB GenePA166048952
PharosQ9H7F4
Clinical trialTMEM185B
Miscellaneous
canSAR (ICR)TMEM185B
HarmonizomeTMEM185B
DataMed IndexTMEM185B
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM185B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:56 CEST 2021

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