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TMEM186 (transmembrane protein 186)

Identity

Alias (NCBI)C16orf51
HGNC (Hugo) TMEM186
HGNC Alias symbDKFZP564K2062
HGNC Previous nameC16orf51
HGNC Previous namechromosome 16 open reading frame 51
LocusID (NCBI) 25880
Atlas_Id 74852
Location 16p13.2  [Link to chromosome band 16p13]
Location_base_pair Starts at 8795180 and ends at 8797639 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM186   24530
Cards
Entrez_Gene (NCBI)TMEM186    transmembrane protein 186
AliasesC16orf51
GeneCards (Weizmann)TMEM186
Ensembl hg19 (Hinxton)ENSG00000184857 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184857 [Gene_View]  ENSG00000184857 [Sequence]  chr16:8795180-8797639 [Contig_View]  TMEM186 [Vega]
ICGC DataPortalENSG00000184857
TCGA cBioPortalTMEM186
AceView (NCBI)TMEM186
Genatlas (Paris)TMEM186
SOURCE (Princeton)TMEM186
Genetics Home Reference (NIH)TMEM186
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM186  -     chr16:8795180-8797639 -  16p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM186  -     16p13.2   [Description]    (hg19-Feb_2009)
GoldenPathTMEM186 - 16p13.2 [CytoView hg19]  TMEM186 - 16p13.2 [CytoView hg38]
ImmunoBaseENSG00000184857
Genome Data Viewer NCBITMEM186 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK093383 AK225638 AK314404 AL080088 BC015912
RefSeq transcript (Entrez)NM_015421
Consensus coding sequences : CCDS (NCBI)TMEM186
Gene ExpressionTMEM186 [ NCBI-GEO ]   TMEM186 [ EBI - ARRAY_EXPRESS ]   TMEM186 [ SEEK ]   TMEM186 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM186 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM186 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25880
GTEX Portal (Tissue expression)TMEM186
Human Protein AtlasENSG00000184857-TMEM186 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96B77   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96B77  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96B77
PhosPhoSitePlusQ96B77
Domains : Interpro (EBI)Tmem186   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM186
SuperfamilyQ96B77
AlphaFold pdb e-kbQ96B77   
Human Protein Atlas [tissue]ENSG00000184857-TMEM186 [tissue]
HPRD08527
Protein Interaction databases
DIP (DOE-UCLA)Q96B77
IntAct (EBI)Q96B77
BioGRIDTMEM186
STRING (EMBL)TMEM186
ZODIACTMEM186
Ontologies - Pathways
QuickGOQ96B77
Ontology : AmiGOprotein binding  mitochondrion  mitochondrion  integral component of membrane  
Ontology : EGO-EBIprotein binding  mitochondrion  mitochondrion  integral component of membrane  
NDEx NetworkTMEM186
Atlas of Cancer Signalling NetworkTMEM186
Wikipedia pathwaysTMEM186
Orthology - Evolution
OrthoDB25880
GeneTree (enSembl)ENSG00000184857
Phylogenetic Trees/Animal Genes : TreeFamTMEM186
Homologs : HomoloGeneTMEM186
Homology/Alignments : Family Browser (UCSC)TMEM186
Gene fusions - Rearrangements
Fusion : QuiverTMEM186
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM186 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM186
dbVarTMEM186
ClinVarTMEM186
MonarchTMEM186
1000_GenomesTMEM186 
Exome Variant ServerTMEM186
GNOMAD BrowserENSG00000184857
Varsome BrowserTMEM186
ACMGTMEM186 variants
VarityQ96B77
Genomic Variants (DGV)TMEM186 [DGVbeta]
DECIPHERTMEM186 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM186 
Mutations
ICGC Data PortalTMEM186 
TCGA Data PortalTMEM186 
Broad Tumor PortalTMEM186
OASIS PortalTMEM186 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM186  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM186
Mutations and Diseases : HGMDTMEM186
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM186
DgiDB (Drug Gene Interaction Database)TMEM186
DoCM (Curated mutations)TMEM186
CIViC (Clinical Interpretations of Variants in Cancer)TMEM186
Cancer3DTMEM186
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM186
MedgenTMEM186
Genetic Testing Registry TMEM186
NextProtQ96B77 [Medical]
GENETestsTMEM186
Target ValidationTMEM186
Huge Navigator TMEM186 [HugePedia]
ClinGenTMEM186
Clinical trials, drugs, therapy
MyCancerGenomeTMEM186
Protein Interactions : CTDTMEM186
Pharm GKB GenePA162406190
PharosQ96B77
Clinical trialTMEM186
Miscellaneous
canSAR (ICR)TMEM186
HarmonizomeTMEM186
DataMed IndexTMEM186
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM186
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:56 CEST 2021

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