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TMEM190 (transmembrane protein 190)

Identity

Alias (NCBI)MDAC1
HGNC (Hugo) TMEM190
HGNC Alias symbMDAC1
LocusID (NCBI) 147744
Atlas_Id 74856
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 55376826 and ends at 55378246 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM190   29632
Cards
Entrez_Gene (NCBI)TMEM190    transmembrane protein 190
AliasesMDAC1
GeneCards (Weizmann)TMEM190
Ensembl hg19 (Hinxton)ENSG00000160472 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160472 [Gene_View]  ENSG00000160472 [Sequence]  chr19:55376826-55378246 [Contig_View]  TMEM190 [Vega]
ICGC DataPortalENSG00000160472
TCGA cBioPortalTMEM190
AceView (NCBI)TMEM190
Genatlas (Paris)TMEM190
SOURCE (Princeton)TMEM190
Genetics Home Reference (NIH)TMEM190
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM190  -     chr19:55376826-55378246 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM190  -     19q13.42   [Description]    (hg19-Feb_2009)
GoldenPathTMEM190 - 19q13.42 [CytoView hg19]  TMEM190 - 19q13.42 [CytoView hg38]
ImmunoBaseENSG00000160472
Genome Data Viewer NCBITMEM190 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF442729 BC128189 BC128190 HY050559 HY223996
RefSeq transcript (Entrez)NM_139172
Consensus coding sequences : CCDS (NCBI)TMEM190
Gene ExpressionTMEM190 [ NCBI-GEO ]   TMEM190 [ EBI - ARRAY_EXPRESS ]   TMEM190 [ SEEK ]   TMEM190 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM190 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM190 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)147744
GTEX Portal (Tissue expression)TMEM190
Human Protein AtlasENSG00000160472-TMEM190 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WZ59   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WZ59  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WZ59
PhosPhoSitePlusQ8WZ59
Domains : Interpro (EBI)TMEM190   
Domain families : Pfam (Sanger)TMEM190 (PF15431)   
Domain families : Pfam (NCBI)pfam15431   
Conserved Domain (NCBI)TMEM190
SuperfamilyQ8WZ59
AlphaFold pdb e-kbQ8WZ59   
Human Protein Atlas [tissue]ENSG00000160472-TMEM190 [tissue]
HPRD14373
Protein Interaction databases
DIP (DOE-UCLA)Q8WZ59
IntAct (EBI)Q8WZ59
BioGRIDTMEM190
STRING (EMBL)TMEM190
ZODIACTMEM190
Ontologies - Pathways
QuickGOQ8WZ59
Ontology : AmiGOinner acrosomal membrane  hematopoietic progenitor cell differentiation  protein binding  nucleus  integral component of membrane  protein self-association  
Ontology : EGO-EBIinner acrosomal membrane  hematopoietic progenitor cell differentiation  protein binding  nucleus  integral component of membrane  protein self-association  
NDEx NetworkTMEM190
Atlas of Cancer Signalling NetworkTMEM190
Wikipedia pathwaysTMEM190
Orthology - Evolution
OrthoDB147744
GeneTree (enSembl)ENSG00000160472
Phylogenetic Trees/Animal Genes : TreeFamTMEM190
Homologs : HomoloGeneTMEM190
Homology/Alignments : Family Browser (UCSC)TMEM190
Gene fusions - Rearrangements
Fusion : QuiverTMEM190
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM190 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM190
dbVarTMEM190
ClinVarTMEM190
MonarchTMEM190
1000_GenomesTMEM190 
Exome Variant ServerTMEM190
GNOMAD BrowserENSG00000160472
Varsome BrowserTMEM190
ACMGTMEM190 variants
VarityQ8WZ59
Genomic Variants (DGV)TMEM190 [DGVbeta]
DECIPHERTMEM190 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM190 
Mutations
ICGC Data PortalTMEM190 
TCGA Data PortalTMEM190 
Broad Tumor PortalTMEM190
OASIS PortalTMEM190 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM190  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM190
Mutations and Diseases : HGMDTMEM190
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM190
DgiDB (Drug Gene Interaction Database)TMEM190
DoCM (Curated mutations)TMEM190
CIViC (Clinical Interpretations of Variants in Cancer)TMEM190
Cancer3DTMEM190
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM190
MedgenTMEM190
Genetic Testing Registry TMEM190
NextProtQ8WZ59 [Medical]
GENETestsTMEM190
Target ValidationTMEM190
Huge Navigator TMEM190 [HugePedia]
ClinGenTMEM190
Clinical trials, drugs, therapy
MyCancerGenomeTMEM190
Protein Interactions : CTDTMEM190
Pharm GKB GenePA162406247
PharosQ8WZ59
Clinical trialTMEM190
Miscellaneous
canSAR (ICR)TMEM190
HarmonizomeTMEM190
DataMed IndexTMEM190
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM190
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:25:57 CEST 2021

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