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TMEM190 (transmembrane protein 190)

Identity

Alias_symbol (synonym)MDAC1
Other alias
HGNC (Hugo) TMEM190
LocusID (NCBI) 147744
Atlas_Id 74856
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 55376826 and ends at 55378246 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM190   29632
Cards
Entrez_Gene (NCBI)TMEM190  147744  transmembrane protein 190
AliasesMDAC1
GeneCards (Weizmann)TMEM190
Ensembl hg19 (Hinxton)ENSG00000160472 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160472 [Gene_View]  chr19:55376826-55378246 [Contig_View]  TMEM190 [Vega]
ICGC DataPortalENSG00000160472
TCGA cBioPortalTMEM190
AceView (NCBI)TMEM190
Genatlas (Paris)TMEM190
WikiGenes147744
SOURCE (Princeton)TMEM190
Genetics Home Reference (NIH)TMEM190
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM190  -     chr19:55376826-55378246 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM190  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblTMEM190 - 19q13.42 [CytoView hg19]  TMEM190 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBITMEM190 [Mapview hg19]  TMEM190 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF442729 BC128189 BC128190 HY050559 HY223996
RefSeq transcript (Entrez)NM_139172
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM190
Cluster EST : UnigeneHs.590943 [ NCBI ]
CGAP (NCI)Hs.590943
Alternative Splicing GalleryENSG00000160472
Gene ExpressionTMEM190 [ NCBI-GEO ]   TMEM190 [ EBI - ARRAY_EXPRESS ]   TMEM190 [ SEEK ]   TMEM190 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM190 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)147744
GTEX Portal (Tissue expression)TMEM190
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WZ59   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WZ59  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WZ59
Splice isoforms : SwissVarQ8WZ59
PhosPhoSitePlusQ8WZ59
Domains : Interpro (EBI)P_trefoil_dom    TMEM190   
Domain families : Pfam (Sanger)TMEM190 (PF15431)   
Domain families : Pfam (NCBI)pfam15431   
Conserved Domain (NCBI)TMEM190
DMDM Disease mutations147744
Blocks (Seattle)TMEM190
SuperfamilyQ8WZ59
Human Protein AtlasENSG00000160472
Peptide AtlasQ8WZ59
HPRD14373
IPIIPI00103847   
Protein Interaction databases
DIP (DOE-UCLA)Q8WZ59
IntAct (EBI)Q8WZ59
FunCoupENSG00000160472
BioGRIDTMEM190
STRING (EMBL)TMEM190
ZODIACTMEM190
Ontologies - Pathways
QuickGOQ8WZ59
Ontology : AmiGOinner acrosomal membrane  hematopoietic progenitor cell differentiation  protein binding  nucleus  integral component of membrane  protein self-association  
Ontology : EGO-EBIinner acrosomal membrane  hematopoietic progenitor cell differentiation  protein binding  nucleus  integral component of membrane  protein self-association  
NDEx NetworkTMEM190
Atlas of Cancer Signalling NetworkTMEM190
Wikipedia pathwaysTMEM190
Orthology - Evolution
OrthoDB147744
GeneTree (enSembl)ENSG00000160472
Phylogenetic Trees/Animal Genes : TreeFamTMEM190
HOVERGENQ8WZ59
HOGENOMQ8WZ59
Homologs : HomoloGeneTMEM190
Homology/Alignments : Family Browser (UCSC)TMEM190
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM190 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM190
dbVarTMEM190
ClinVarTMEM190
1000_GenomesTMEM190 
Exome Variant ServerTMEM190
ExAC (Exome Aggregation Consortium)TMEM190 (select the gene name)
Genetic variants : HAPMAP147744
Genomic Variants (DGV)TMEM190 [DGVbeta]
DECIPHERTMEM190 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM190 
Mutations
ICGC Data PortalTMEM190 
TCGA Data PortalTMEM190 
Broad Tumor PortalTMEM190
OASIS PortalTMEM190 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM190  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM190
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM190
DgiDB (Drug Gene Interaction Database)TMEM190
DoCM (Curated mutations)TMEM190 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM190 (select a term)
intoGenTMEM190
Cancer3DTMEM190(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM190
Genetic Testing Registry TMEM190
NextProtQ8WZ59 [Medical]
TSGene147744
GENETestsTMEM190
Target ValidationTMEM190
Huge Navigator TMEM190 [HugePedia]
snp3D : Map Gene to Disease147744
BioCentury BCIQTMEM190
ClinGenTMEM190
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD147744
Chemical/Pharm GKB GenePA162406247
Clinical trialTMEM190
Miscellaneous
canSAR (ICR)TMEM190 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM190
EVEXTMEM190
GoPubMedTMEM190
iHOPTMEM190
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:48 CEST 2017

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