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TMEM192 (transmembrane protein 192)

Identity

Alias_symbol (synonym)FLJ38482
Other alias-
HGNC (Hugo) TMEM192
LocusID (NCBI) 201931
Atlas_Id 52963
Location 4q32.3  [Link to chromosome band 4q32]
Location_base_pair Starts at 165076078 and ends at 165112872 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF320 (19q13.41) / TMEM192 (4q32.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM192   26775
Cards
Entrez_Gene (NCBI)TMEM192  201931  transmembrane protein 192
Aliases
GeneCards (Weizmann)TMEM192
Ensembl hg19 (Hinxton)ENSG00000170088 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170088 [Gene_View]  chr4:165076078-165112872 [Contig_View]  TMEM192 [Vega]
ICGC DataPortalENSG00000170088
TCGA cBioPortalTMEM192
AceView (NCBI)TMEM192
Genatlas (Paris)TMEM192
WikiGenes201931
SOURCE (Princeton)TMEM192
Genetics Home Reference (NIH)TMEM192
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM192  -     chr4:165076078-165112872 -  4q32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM192  -     4q32.3   [Description]    (hg19-Feb_2009)
EnsemblTMEM192 - 4q32.3 [CytoView hg19]  TMEM192 - 4q32.3 [CytoView hg38]
Mapping of homologs : NCBITMEM192 [Mapview hg19]  TMEM192 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA346826 AK095801 AW137472 BC036301 BX538029
RefSeq transcript (Entrez)NM_001100389 NM_152681
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM192
Cluster EST : UnigeneHs.704511 [ NCBI ]
CGAP (NCI)Hs.704511
Alternative Splicing GalleryENSG00000170088
Gene ExpressionTMEM192 [ NCBI-GEO ]   TMEM192 [ EBI - ARRAY_EXPRESS ]   TMEM192 [ SEEK ]   TMEM192 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM192 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)201931
GTEX Portal (Tissue expression)TMEM192
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IY95   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IY95  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IY95
Splice isoforms : SwissVarQ8IY95
PhosPhoSitePlusQ8IY95
Domains : Interpro (EBI)TMEM192   
Domain families : Pfam (Sanger)TMEM192 (PF14802)   
Domain families : Pfam (NCBI)pfam14802   
Conserved Domain (NCBI)TMEM192
DMDM Disease mutations201931
Blocks (Seattle)TMEM192
SuperfamilyQ8IY95
Human Protein AtlasENSG00000170088
Peptide AtlasQ8IY95
HPRD08787
IPIIPI00855873   IPI00873121   IPI00965247   
Protein Interaction databases
DIP (DOE-UCLA)Q8IY95
IntAct (EBI)Q8IY95
FunCoupENSG00000170088
BioGRIDTMEM192
STRING (EMBL)TMEM192
ZODIACTMEM192
Ontologies - Pathways
QuickGOQ8IY95
Ontology : AmiGOnucleus  nucleoplasm  lysosome  lysosomal membrane  endosome  late endosome  endoplasmic reticulum  Golgi apparatus  plasma membrane  integral component of membrane  protein homodimerization activity  perinuclear region of cytoplasm  extracellular exosome  
Ontology : EGO-EBInucleus  nucleoplasm  lysosome  lysosomal membrane  endosome  late endosome  endoplasmic reticulum  Golgi apparatus  plasma membrane  integral component of membrane  protein homodimerization activity  perinuclear region of cytoplasm  extracellular exosome  
NDEx NetworkTMEM192
Atlas of Cancer Signalling NetworkTMEM192
Wikipedia pathwaysTMEM192
Orthology - Evolution
OrthoDB201931
GeneTree (enSembl)ENSG00000170088
Phylogenetic Trees/Animal Genes : TreeFamTMEM192
HOVERGENQ8IY95
HOGENOMQ8IY95
Homologs : HomoloGeneTMEM192
Homology/Alignments : Family Browser (UCSC)TMEM192
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM192 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM192
dbVarTMEM192
ClinVarTMEM192
1000_GenomesTMEM192 
Exome Variant ServerTMEM192
ExAC (Exome Aggregation Consortium)TMEM192 (select the gene name)
Genetic variants : HAPMAP201931
Genomic Variants (DGV)TMEM192 [DGVbeta]
DECIPHERTMEM192 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM192 
Mutations
ICGC Data PortalTMEM192 
TCGA Data PortalTMEM192 
Broad Tumor PortalTMEM192
OASIS PortalTMEM192 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM192  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM192
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM192
DgiDB (Drug Gene Interaction Database)TMEM192
DoCM (Curated mutations)TMEM192 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM192 (select a term)
intoGenTMEM192
Cancer3DTMEM192(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM192
Genetic Testing Registry TMEM192
NextProtQ8IY95 [Medical]
TSGene201931
GENETestsTMEM192
Target ValidationTMEM192
Huge Navigator TMEM192 [HugePedia]
snp3D : Map Gene to Disease201931
BioCentury BCIQTMEM192
ClinGenTMEM192
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD201931
Chemical/Pharm GKB GenePA162406273
Clinical trialTMEM192
Miscellaneous
canSAR (ICR)TMEM192 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM192
EVEXTMEM192
GoPubMedTMEM192
iHOPTMEM192
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:35:24 CEST 2017

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