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TMEM198 (transmembrane protein 198)

Identity

Alias (NCBI)TMEM198A
HGNC (Hugo) TMEM198
HGNC Alias symbMGC99813
TMEM198A
LocusID (NCBI) 130612
Atlas_Id 74863
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 219543663 and ends at 219550596 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM198   33704
Cards
Entrez_Gene (NCBI)TMEM198    transmembrane protein 198
AliasesTMEM198A
GeneCards (Weizmann)TMEM198
Ensembl hg19 (Hinxton)ENSG00000188760 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188760 [Gene_View]  ENSG00000188760 [Sequence]  chr2:219543663-219550596 [Contig_View]  TMEM198 [Vega]
ICGC DataPortalENSG00000188760
TCGA cBioPortalTMEM198
AceView (NCBI)TMEM198
Genatlas (Paris)TMEM198
SOURCE (Princeton)TMEM198
Genetics Home Reference (NIH)TMEM198
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM198  -     chr2:219543663-219550596 +  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM198  -     2q35   [Description]    (hg19-Feb_2009)
GoldenPathTMEM198 - 2q35 [CytoView hg19]  TMEM198 - 2q35 [CytoView hg38]
ImmunoBaseENSG00000188760
Genome Data Viewer NCBITMEM198 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK123175 AK302369 BC068567 BC080573 BI753377
RefSeq transcript (Entrez)NM_001005209 NM_001303098
Consensus coding sequences : CCDS (NCBI)TMEM198
Gene ExpressionTMEM198 [ NCBI-GEO ]   TMEM198 [ EBI - ARRAY_EXPRESS ]   TMEM198 [ SEEK ]   TMEM198 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM198 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM198 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)130612
GTEX Portal (Tissue expression)TMEM198
Human Protein AtlasENSG00000188760-TMEM198 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ66K66   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ66K66  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ66K66
PhosPhoSitePlusQ66K66
Domains : Interpro (EBI)DUF4203    TMEM198   
Domain families : Pfam (Sanger)DUF4203 (PF13886)   
Domain families : Pfam (NCBI)pfam13886   
Conserved Domain (NCBI)TMEM198
SuperfamilyQ66K66
AlphaFold pdb e-kbQ66K66   
Human Protein Atlas [tissue]ENSG00000188760-TMEM198 [tissue]
HPRD14718
Protein Interaction databases
DIP (DOE-UCLA)Q66K66
IntAct (EBI)Q66K66
BioGRIDTMEM198
STRING (EMBL)TMEM198
ZODIACTMEM198
Ontologies - Pathways
QuickGOQ66K66
Ontology : AmiGOplasma membrane  plasma membrane  multicellular organism development  integral component of membrane  Wnt signaling pathway  cytoplasmic vesicle  cytoplasmic vesicle  positive regulation of canonical Wnt signaling pathway  positive regulation of canonical Wnt signaling pathway  
Ontology : EGO-EBIplasma membrane  plasma membrane  multicellular organism development  integral component of membrane  Wnt signaling pathway  cytoplasmic vesicle  cytoplasmic vesicle  positive regulation of canonical Wnt signaling pathway  positive regulation of canonical Wnt signaling pathway  
NDEx NetworkTMEM198
Atlas of Cancer Signalling NetworkTMEM198
Wikipedia pathwaysTMEM198
Orthology - Evolution
OrthoDB130612
GeneTree (enSembl)ENSG00000188760
Phylogenetic Trees/Animal Genes : TreeFamTMEM198
Homologs : HomoloGeneTMEM198
Homology/Alignments : Family Browser (UCSC)TMEM198
Gene fusions - Rearrangements
Fusion : QuiverTMEM198
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM198 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM198
dbVarTMEM198
ClinVarTMEM198
MonarchTMEM198
1000_GenomesTMEM198 
Exome Variant ServerTMEM198
GNOMAD BrowserENSG00000188760
Varsome BrowserTMEM198
ACMGTMEM198 variants
VarityQ66K66
Genomic Variants (DGV)TMEM198 [DGVbeta]
DECIPHERTMEM198 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM198 
Mutations
ICGC Data PortalTMEM198 
TCGA Data PortalTMEM198 
Broad Tumor PortalTMEM198
OASIS PortalTMEM198 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM198  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM198
Mutations and Diseases : HGMDTMEM198
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM198
DgiDB (Drug Gene Interaction Database)TMEM198
DoCM (Curated mutations)TMEM198
CIViC (Clinical Interpretations of Variants in Cancer)TMEM198
Cancer3DTMEM198
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM198
MedgenTMEM198
Genetic Testing Registry TMEM198
NextProtQ66K66 [Medical]
GENETestsTMEM198
Target ValidationTMEM198
Huge Navigator TMEM198 [HugePedia]
ClinGenTMEM198
Clinical trials, drugs, therapy
MyCancerGenomeTMEM198
Protein Interactions : CTDTMEM198
Pharm GKB GenePA162406347
PharosQ66K66
Clinical trialTMEM198
Miscellaneous
canSAR (ICR)TMEM198
HarmonizomeTMEM198
DataMed IndexTMEM198
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM198
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:25:58 CEST 2021

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