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TMEM198B (transmembrane protein 198B (pseudogene))

Identity

Alias_namestransmembrane protein 198, pseudogene
Other alias-
HGNC (Hugo) TMEM198B
LocusID (NCBI) 440104
Atlas_Id 74864
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55832847 and ends at 55836246 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM198B   43629
Cards
Entrez_Gene (NCBI)TMEM198B  440104  transmembrane protein 198B (pseudogene)
Aliases
GeneCards (Weizmann)TMEM198B
Ensembl hg19 (Hinxton)ENSG00000182796 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182796 [Gene_View]  chr12:55832847-55836246 [Contig_View]  TMEM198B [Vega]
ICGC DataPortalENSG00000182796
TCGA cBioPortalTMEM198B
AceView (NCBI)TMEM198B
Genatlas (Paris)TMEM198B
WikiGenes440104
SOURCE (Princeton)TMEM198B
Genetics Home Reference (NIH)TMEM198B
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM198B  -     chr12:55832847-55836246 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM198B  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblTMEM198B - 12q13.2 [CytoView hg19]  TMEM198B - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBITMEM198B [Mapview hg19]  TMEM198B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF370398 AK057179 AK094261 AK095340 AW139988
RefSeq transcript (Entrez)NM_001013700
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM198B
Cluster EST : UnigeneHs.731828 [ NCBI ]
CGAP (NCI)Hs.731828
Alternative Splicing GalleryENSG00000182796
Gene ExpressionTMEM198B [ NCBI-GEO ]   TMEM198B [ EBI - ARRAY_EXPRESS ]   TMEM198B [ SEEK ]   TMEM198B [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM198B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440104
GTEX Portal (Tissue expression)TMEM198B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM198B
DMDM Disease mutations440104
Blocks (Seattle)TMEM198B
Human Protein AtlasENSG00000182796
IPIIPI00432255   IPI00435941   
Protein Interaction databases
FunCoupENSG00000182796
BioGRIDTMEM198B
STRING (EMBL)TMEM198B
ZODIACTMEM198B
Ontologies - Pathways
Huge Navigator TMEM198B [HugePedia]
snp3D : Map Gene to Disease440104
BioCentury BCIQTMEM198B
ClinGenTMEM198B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440104
Clinical trialTMEM198B
Miscellaneous
canSAR (ICR)TMEM198B (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM198B
EVEXTMEM198B
GoPubMedTMEM198B
iHOPTMEM198B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:46:04 CEST 2017

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