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TMEM205 (transmembrane protein 205)

Identity

Alias_symbol (synonym)UNQ501
MBC3205
Other alias
HGNC (Hugo) TMEM205
LocusID (NCBI) 374882
Atlas_Id 55009
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 11453452 and ends at 11456981 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
OLFM2 (19p13.2) / TMEM205 (19p13.2)RAB3D (19p13.2) / TMEM205 (19p13.2)TMEM205 (19p13.2) / TMEM205 (19p13.2)
OLFM2 19p13.2 / TMEM205 19p13.2RAB3D 19p13.2 / TMEM205 19p13.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM205   29631
Cards
Entrez_Gene (NCBI)TMEM205  374882  transmembrane protein 205
AliasesUNQ501
GeneCards (Weizmann)TMEM205
Ensembl hg19 (Hinxton)ENSG00000105518 [Gene_View]  chr19:11453452-11456981 [Contig_View]  TMEM205 [Vega]
Ensembl hg38 (Hinxton)ENSG00000105518 [Gene_View]  chr19:11453452-11456981 [Contig_View]  TMEM205 [Vega]
ICGC DataPortalENSG00000105518
TCGA cBioPortalTMEM205
AceView (NCBI)TMEM205
Genatlas (Paris)TMEM205
WikiGenes374882
SOURCE (Princeton)TMEM205
Genetics Home Reference (NIH)TMEM205
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM205  -     chr19:11453452-11456981 -  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM205  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblTMEM205 - 19p13.2 [CytoView hg19]  TMEM205 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBITMEM205 [Mapview hg19]  TMEM205 [Mapview hg38]
OMIM613771   
Gene and transcription
Genbank (Entrez)AK127147 AK291979 AY358949 BC008365 BC064948
RefSeq transcript (Entrez)NM_001145416 NM_001321112 NM_001321113 NM_001321114 NM_033408 NM_198536
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)TMEM205
Cluster EST : UnigeneHs.737060 [ NCBI ]
CGAP (NCI)Hs.737060
Alternative Splicing GalleryENSG00000105518
Gene ExpressionTMEM205 [ NCBI-GEO ]   TMEM205 [ EBI - ARRAY_EXPRESS ]   TMEM205 [ SEEK ]   TMEM205 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM205 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374882
GTEX Portal (Tissue expression)TMEM205
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UW68   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UW68  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UW68
Splice isoforms : SwissVarQ6UW68
PhosPhoSitePlusQ6UW68
Domains : Interpro (EBI)DUF4149   
Domain families : Pfam (Sanger)DUF4149 (PF13664)   
Domain families : Pfam (NCBI)pfam13664   
Conserved Domain (NCBI)TMEM205
DMDM Disease mutations374882
Blocks (Seattle)TMEM205
SuperfamilyQ6UW68
Human Protein AtlasENSG00000105518
Peptide AtlasQ6UW68
HPRD18605
IPIIPI00063130   IPI00444731   
Protein Interaction databases
DIP (DOE-UCLA)Q6UW68
IntAct (EBI)Q6UW68
FunCoupENSG00000105518
BioGRIDTMEM205
STRING (EMBL)TMEM205
ZODIACTMEM205
Ontologies - Pathways
QuickGOQ6UW68
Ontology : AmiGOintegral component of membrane  extracellular exosome  
Ontology : EGO-EBIintegral component of membrane  extracellular exosome  
NDEx NetworkTMEM205
Atlas of Cancer Signalling NetworkTMEM205
Wikipedia pathwaysTMEM205
Orthology - Evolution
OrthoDB374882
GeneTree (enSembl)ENSG00000105518
Phylogenetic Trees/Animal Genes : TreeFamTMEM205
HOVERGENQ6UW68
HOGENOMQ6UW68
Homologs : HomoloGeneTMEM205
Homology/Alignments : Family Browser (UCSC)TMEM205
Gene fusions - Rearrangements
Fusion : MitelmanOLFM2/TMEM205 [19p13.2/19p13.2]  [t(19;19)(p13;p13)]  
Fusion : MitelmanRAB3D/TMEM205 [19p13.2/19p13.2]  [t(19;19)(p13;p13)]  
Fusion: TCGAOLFM2 19p13.2 TMEM205 19p13.2 OV
Fusion: TCGARAB3D 19p13.2 TMEM205 19p13.2 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM205 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM205
dbVarTMEM205
ClinVarTMEM205
1000_GenomesTMEM205 
Exome Variant ServerTMEM205
ExAC (Exome Aggregation Consortium)TMEM205 (select the gene name)
Genetic variants : HAPMAP374882
Genomic Variants (DGV)TMEM205 [DGVbeta]
DECIPHER (Syndromes)19:11453452-11456981  ENSG00000105518
CONAN: Copy Number AnalysisTMEM205 
Mutations
ICGC Data PortalTMEM205 
TCGA Data PortalTMEM205 
Broad Tumor PortalTMEM205
OASIS PortalTMEM205 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM205  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM205
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM205
DgiDB (Drug Gene Interaction Database)TMEM205
DoCM (Curated mutations)TMEM205 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM205 (select a term)
intoGenTMEM205
Cancer3DTMEM205(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613771   
Orphanet
MedgenTMEM205
Genetic Testing Registry TMEM205
NextProtQ6UW68 [Medical]
TSGene374882
GENETestsTMEM205
Huge Navigator TMEM205 [HugePedia]
snp3D : Map Gene to Disease374882
BioCentury BCIQTMEM205
ClinGenTMEM205
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374882
Chemical/Pharm GKB GenePA162406385
Clinical trialTMEM205
Miscellaneous
canSAR (ICR)TMEM205 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM205
EVEXTMEM205
GoPubMedTMEM205
iHOPTMEM205
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:22:44 CEST 2017

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