Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TMEM206 (-)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 55248
Atlas_Id 54710
Location -  [Link to chromosome band ]
Location_base_pair Starts at 212364474 and ends at 212414925 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TMEM206 (1q32.3) / PSAP (10q22.1)TMEM206 (1q32.3) / RCOR3 (1q32.2)TMEM206 1q32.3 / RCOR3 1q32.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 3 ]

Solid Tumors TranslocLungSquamCellCarcID6819 TT_t0101q32q32ID104055 TT_t0110q32q22ID6837


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)TMEM206  55248  -
Aliases
GeneCards (Weizmann)TMEM206
Ensembl hg19 (Hinxton)ENSG00000065600 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000065600 [Gene_View]  ENSG00000065600 [Sequence]  chr1:212364474-212414925 [Contig_View]  TMEM206 [Vega]
ICGC DataPortalENSG00000065600
TCGA cBioPortalTMEM206
AceView (NCBI)TMEM206
Genatlas (Paris)TMEM206
WikiGenes55248
SOURCE (Princeton)TMEM206
Genetics Home Reference (NIH)TMEM206
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM206  -     chr1:212364474-212414925 -  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM206  -     -   [Description]    (hg19-Feb_2009)
GoldenPathTMEM206 - - [CytoView hg19]  TMEM206 - - [CytoView hg38]
ImmunoBaseENSG00000065600
Mapping of homologs : NCBITMEM206 [Mapview hg19]  TMEM206 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM206
Alternative Splicing GalleryENSG00000065600
Gene ExpressionTMEM206 [ NCBI-GEO ]   TMEM206 [ EBI - ARRAY_EXPRESS ]   TMEM206 [ SEEK ]   TMEM206 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM206 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)55248
GTEX Portal (Tissue expression)TMEM206
Human Protein AtlasENSG00000065600-TMEM206 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM206
DMDM Disease mutations55248
Blocks (Seattle)TMEM206
Human Protein Atlas [tissue]ENSG00000065600-TMEM206 [tissue]
HPRD07707
IPIIPI00303401   IPI00980690   
Protein Interaction databases
FunCoupENSG00000065600
BioGRIDTMEM206
STRING (EMBL)TMEM206
ZODIACTMEM206
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease55248
BioCentury BCIQTMEM206
ClinGenTMEM206
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55248
Clinical trialTMEM206
Miscellaneous
canSAR (ICR)TMEM206 (select the gene name)
DataMed IndexTMEM206
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM206
EVEXTMEM206
GoPubMedTMEM206
iHOPTMEM206
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 26 18:32:39 CEST 2019

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