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TMEM209 (transmembrane protein 209)

Identity

Alias_symbol (synonym)FLJ14803
NET31
Other alias
HGNC (Hugo) TMEM209
LocusID (NCBI) 84928
Atlas_Id 53074
Location 7q32.2  [Link to chromosome band 7q32]
Location_base_pair Starts at 129804553 and ends at 129845338 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM209   21898
Cards
Entrez_Gene (NCBI)TMEM209  84928  transmembrane protein 209
AliasesNET31
GeneCards (Weizmann)TMEM209
Ensembl hg19 (Hinxton)ENSG00000146842 [Gene_View]  chr7:129804553-129845338 [Contig_View]  TMEM209 [Vega]
Ensembl hg38 (Hinxton)ENSG00000146842 [Gene_View]  chr7:129804553-129845338 [Contig_View]  TMEM209 [Vega]
ICGC DataPortalENSG00000146842
TCGA cBioPortalTMEM209
AceView (NCBI)TMEM209
Genatlas (Paris)TMEM209
WikiGenes84928
SOURCE (Princeton)TMEM209
Genetics Home Reference (NIH)TMEM209
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM209  -     chr7:129804553-129845338 -  7q32.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM209  -     7q32.2   [Description]    (hg38-Dec_2013)
EnsemblTMEM209 - 7q32.2 [CytoView hg19]  TMEM209 - 7q32.2 [CytoView hg38]
Mapping of homologs : NCBITMEM209 [Mapview hg19]  TMEM209 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI589217 AK027678 AK027709 AK074732 BC016721
RefSeq transcript (Entrez)NM_001301163 NM_032842
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)TMEM209
Cluster EST : UnigeneHs.267245 [ NCBI ]
CGAP (NCI)Hs.267245
Alternative Splicing GalleryENSG00000146842
Gene ExpressionTMEM209 [ NCBI-GEO ]   TMEM209 [ EBI - ARRAY_EXPRESS ]   TMEM209 [ SEEK ]   TMEM209 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM209 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84928
GTEX Portal (Tissue expression)TMEM209
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96SK2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96SK2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96SK2
Splice isoforms : SwissVarQ96SK2
PhosPhoSitePlusQ96SK2
Domains : Interpro (EBI)Cytochrome_B561-rel   
Domain families : Pfam (Sanger)CytochromB561_N (PF09786)   
Domain families : Pfam (NCBI)pfam09786   
Conserved Domain (NCBI)TMEM209
DMDM Disease mutations84928
Blocks (Seattle)TMEM209
SuperfamilyQ96SK2
Human Protein AtlasENSG00000146842
Peptide AtlasQ96SK2
HPRD07871
IPIIPI00045764   IPI00890756   IPI00447589   IPI00382802   IPI00946137   
Protein Interaction databases
DIP (DOE-UCLA)Q96SK2
IntAct (EBI)Q96SK2
FunCoupENSG00000146842
BioGRIDTMEM209
STRING (EMBL)TMEM209
ZODIACTMEM209
Ontologies - Pathways
QuickGOQ96SK2
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM209
Atlas of Cancer Signalling NetworkTMEM209
Wikipedia pathwaysTMEM209
Orthology - Evolution
OrthoDB84928
GeneTree (enSembl)ENSG00000146842
Phylogenetic Trees/Animal Genes : TreeFamTMEM209
HOVERGENQ96SK2
HOGENOMQ96SK2
Homologs : HomoloGeneTMEM209
Homology/Alignments : Family Browser (UCSC)TMEM209
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM209 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM209
dbVarTMEM209
ClinVarTMEM209
1000_GenomesTMEM209 
Exome Variant ServerTMEM209
ExAC (Exome Aggregation Consortium)TMEM209 (select the gene name)
Genetic variants : HAPMAP84928
Genomic Variants (DGV)TMEM209 [DGVbeta]
DECIPHER (Syndromes)7:129804553-129845338  ENSG00000146842
CONAN: Copy Number AnalysisTMEM209 
Mutations
ICGC Data PortalTMEM209 
TCGA Data PortalTMEM209 
Broad Tumor PortalTMEM209
OASIS PortalTMEM209 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM209  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM209
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM209
DgiDB (Drug Gene Interaction Database)TMEM209
DoCM (Curated mutations)TMEM209 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM209 (select a term)
intoGenTMEM209
Cancer3DTMEM209(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM209
Genetic Testing Registry TMEM209
NextProtQ96SK2 [Medical]
TSGene84928
GENETestsTMEM209
Huge Navigator TMEM209 [HugePedia]
snp3D : Map Gene to Disease84928
BioCentury BCIQTMEM209
ClinGenTMEM209
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84928
Chemical/Pharm GKB GenePA162406425
Clinical trialTMEM209
Miscellaneous
canSAR (ICR)TMEM209 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM209
EVEXTMEM209
GoPubMedTMEM209
iHOPTMEM209
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 13:31:28 CET 2017

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