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TMEM209 (transmembrane protein 209)

Identity

Alias (NCBI)NET31
HGNC (Hugo) TMEM209
HGNC Alias symbFLJ14803
NET31
LocusID (NCBI) 84928
Atlas_Id 53074
Location 7q32.2  [Link to chromosome band 7q32]
Location_base_pair Starts at 130164713 and ends at 130205406 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM209   21898
Cards
Entrez_Gene (NCBI)TMEM209    transmembrane protein 209
AliasesNET31
GeneCards (Weizmann)TMEM209
Ensembl hg19 (Hinxton)ENSG00000146842 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146842 [Gene_View]  ENSG00000146842 [Sequence]  chr7:130164713-130205406 [Contig_View]  TMEM209 [Vega]
ICGC DataPortalENSG00000146842
TCGA cBioPortalTMEM209
AceView (NCBI)TMEM209
Genatlas (Paris)TMEM209
SOURCE (Princeton)TMEM209
Genetics Home Reference (NIH)TMEM209
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM209  -     chr7:130164713-130205406 -  7q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM209  -     7q32.2   [Description]    (hg19-Feb_2009)
GoldenPathTMEM209 - 7q32.2 [CytoView hg19]  TMEM209 - 7q32.2 [CytoView hg38]
ImmunoBaseENSG00000146842
Genome Data Viewer NCBITMEM209 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI589217 AK027678 AK027709 AK074732 BC016721
RefSeq transcript (Entrez)NM_001301163 NM_001363478 NM_032842
Consensus coding sequences : CCDS (NCBI)TMEM209
Gene ExpressionTMEM209 [ NCBI-GEO ]   TMEM209 [ EBI - ARRAY_EXPRESS ]   TMEM209 [ SEEK ]   TMEM209 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM209 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM209 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84928
GTEX Portal (Tissue expression)TMEM209
Human Protein AtlasENSG00000146842-TMEM209 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96SK2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96SK2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96SK2
PhosPhoSitePlusQ96SK2
Domains : Interpro (EBI)Cytochrome_B561-rel   
Domain families : Pfam (Sanger)CytochromB561_N (PF09786)   
Domain families : Pfam (NCBI)pfam09786   
Conserved Domain (NCBI)TMEM209
SuperfamilyQ96SK2
AlphaFold pdb e-kbQ96SK2   
Human Protein Atlas [tissue]ENSG00000146842-TMEM209 [tissue]
HPRD07871
Protein Interaction databases
DIP (DOE-UCLA)Q96SK2
IntAct (EBI)Q96SK2
BioGRIDTMEM209
STRING (EMBL)TMEM209
ZODIACTMEM209
Ontologies - Pathways
QuickGOQ96SK2
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM209
Atlas of Cancer Signalling NetworkTMEM209
Wikipedia pathwaysTMEM209
Orthology - Evolution
OrthoDB84928
GeneTree (enSembl)ENSG00000146842
Phylogenetic Trees/Animal Genes : TreeFamTMEM209
Homologs : HomoloGeneTMEM209
Homology/Alignments : Family Browser (UCSC)TMEM209
Gene fusions - Rearrangements
Fusion : QuiverTMEM209
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM209 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM209
dbVarTMEM209
ClinVarTMEM209
MonarchTMEM209
1000_GenomesTMEM209 
Exome Variant ServerTMEM209
GNOMAD BrowserENSG00000146842
Varsome BrowserTMEM209
ACMGTMEM209 variants
VarityQ96SK2
Genomic Variants (DGV)TMEM209 [DGVbeta]
DECIPHERTMEM209 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM209 
Mutations
ICGC Data PortalTMEM209 
TCGA Data PortalTMEM209 
Broad Tumor PortalTMEM209
OASIS PortalTMEM209 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM209  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM209
Mutations and Diseases : HGMDTMEM209
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM209
DgiDB (Drug Gene Interaction Database)TMEM209
DoCM (Curated mutations)TMEM209
CIViC (Clinical Interpretations of Variants in Cancer)TMEM209
Cancer3DTMEM209
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM209
MedgenTMEM209
Genetic Testing Registry TMEM209
NextProtQ96SK2 [Medical]
GENETestsTMEM209
Target ValidationTMEM209
Huge Navigator TMEM209 [HugePedia]
ClinGenTMEM209
Clinical trials, drugs, therapy
MyCancerGenomeTMEM209
Protein Interactions : CTDTMEM209
Pharm GKB GenePA162406425
PharosQ96SK2
Clinical trialTMEM209
Miscellaneous
canSAR (ICR)TMEM209
HarmonizomeTMEM209
DataMed IndexTMEM209
Probes
Litterature
PubMed32 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM209
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:35:29 CEST 2021

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