Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMEM212 (transmembrane protein 212)

Identity

Alias_symbol (synonym)FLJ23172
Other alias-
HGNC (Hugo) TMEM212
LocusID (NCBI) 389177
Atlas_Id 74877
Location 3q26.31  [Link to chromosome band 3q26]
Location_base_pair Starts at 171843349 and ends at 171859318 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM212   34295
Cards
Entrez_Gene (NCBI)TMEM212  389177  transmembrane protein 212
Aliases
GeneCards (Weizmann)TMEM212
Ensembl hg19 (Hinxton)ENSG00000186329 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186329 [Gene_View]  chr3:171843349-171859318 [Contig_View]  TMEM212 [Vega]
ICGC DataPortalENSG00000186329
TCGA cBioPortalTMEM212
AceView (NCBI)TMEM212
Genatlas (Paris)TMEM212
WikiGenes389177
SOURCE (Princeton)TMEM212
Genetics Home Reference (NIH)TMEM212
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM212  -     chr3:171843349-171859318 +  3q26.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM212  -     3q26.31   [Description]    (hg19-Feb_2009)
EnsemblTMEM212 - 3q26.31 [CytoView hg19]  TMEM212 - 3q26.31 [CytoView hg38]
Mapping of homologs : NCBITMEM212 [Mapview hg19]  TMEM212 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026825 DB199311
RefSeq transcript (Entrez)NM_001164436
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM212
Cluster EST : UnigeneHs.642307 [ NCBI ]
CGAP (NCI)Hs.642307
Alternative Splicing GalleryENSG00000186329
Gene ExpressionTMEM212 [ NCBI-GEO ]   TMEM212 [ EBI - ARRAY_EXPRESS ]   TMEM212 [ SEEK ]   TMEM212 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM212 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389177
GTEX Portal (Tissue expression)TMEM212
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NML5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NML5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NML5
Splice isoforms : SwissVarA6NML5
PhosPhoSitePlusA6NML5
Domains : Interpro (EBI)MS4A   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM212
DMDM Disease mutations389177
Blocks (Seattle)TMEM212
SuperfamilyA6NML5
Human Protein AtlasENSG00000186329
Peptide AtlasA6NML5
IPIIPI00743605   IPI00925978   IPI00925801   
Protein Interaction databases
DIP (DOE-UCLA)A6NML5
IntAct (EBI)A6NML5
FunCoupENSG00000186329
BioGRIDTMEM212
STRING (EMBL)TMEM212
ZODIACTMEM212
Ontologies - Pathways
QuickGOA6NML5
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM212
Atlas of Cancer Signalling NetworkTMEM212
Wikipedia pathwaysTMEM212
Orthology - Evolution
OrthoDB389177
GeneTree (enSembl)ENSG00000186329
Phylogenetic Trees/Animal Genes : TreeFamTMEM212
HOVERGENA6NML5
HOGENOMA6NML5
Homologs : HomoloGeneTMEM212
Homology/Alignments : Family Browser (UCSC)TMEM212
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM212 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM212
dbVarTMEM212
ClinVarTMEM212
1000_GenomesTMEM212 
Exome Variant ServerTMEM212
ExAC (Exome Aggregation Consortium)TMEM212 (select the gene name)
Genetic variants : HAPMAP389177
Genomic Variants (DGV)TMEM212 [DGVbeta]
DECIPHERTMEM212 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM212 
Mutations
ICGC Data PortalTMEM212 
TCGA Data PortalTMEM212 
Broad Tumor PortalTMEM212
OASIS PortalTMEM212 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM212  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM212
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM212
DgiDB (Drug Gene Interaction Database)TMEM212
DoCM (Curated mutations)TMEM212 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM212 (select a term)
intoGenTMEM212
Cancer3DTMEM212(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM212
Genetic Testing Registry TMEM212
NextProtA6NML5 [Medical]
TSGene389177
GENETestsTMEM212
Target ValidationTMEM212
Huge Navigator TMEM212 [HugePedia]
snp3D : Map Gene to Disease389177
BioCentury BCIQTMEM212
ClinGenTMEM212
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389177
Chemical/Pharm GKB GenePA162406475
Clinical trialTMEM212
Miscellaneous
canSAR (ICR)TMEM212 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM212
EVEXTMEM212
GoPubMedTMEM212
iHOPTMEM212
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:41:50 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.