Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TMEM213 (transmembrane protein 213)

Identity

Alias (NCBI)-
HGNC (Hugo) TMEM213
LocusID (NCBI) 155006
Atlas_Id 74879
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 138797994 and ends at 138806759 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM213   27220
Cards
Entrez_Gene (NCBI)TMEM213    transmembrane protein 213
Aliases
GeneCards (Weizmann)TMEM213
Ensembl hg19 (Hinxton)ENSG00000214128 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214128 [Gene_View]  ENSG00000214128 [Sequence]  chr7:138797994-138806759 [Contig_View]  TMEM213 [Vega]
ICGC DataPortalENSG00000214128
TCGA cBioPortalTMEM213
AceView (NCBI)TMEM213
Genatlas (Paris)TMEM213
SOURCE (Princeton)TMEM213
Genetics Home Reference (NIH)TMEM213
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM213  -     chr7:138797994-138806759 +  7q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM213  -     7q34   [Description]    (hg19-Feb_2009)
GoldenPathTMEM213 - 7q34 [CytoView hg19]  TMEM213 - 7q34 [CytoView hg38]
ImmunoBaseENSG00000214128
Genome Data Viewer NCBITMEM213 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI672404 AK055760 AK055841 AW771283 BC058028
RefSeq transcript (Entrez)NM_001085429
Consensus coding sequences : CCDS (NCBI)TMEM213
Gene ExpressionTMEM213 [ NCBI-GEO ]   TMEM213 [ EBI - ARRAY_EXPRESS ]   TMEM213 [ SEEK ]   TMEM213 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM213 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM213 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)155006
GTEX Portal (Tissue expression)TMEM213
Human Protein AtlasENSG00000214128-TMEM213 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2RRL7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA2RRL7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA2RRL7
PhosPhoSitePlusA2RRL7
Domains : Interpro (EBI)TMEM213   
Domain families : Pfam (Sanger)TMEM213 (PF15192)   
Domain families : Pfam (NCBI)pfam15192   
Conserved Domain (NCBI)TMEM213
SuperfamilyA2RRL7
AlphaFold pdb e-kbA2RRL7   
Human Protein Atlas [tissue]ENSG00000214128-TMEM213 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)A2RRL7
IntAct (EBI)A2RRL7
BioGRIDTMEM213
STRING (EMBL)TMEM213
ZODIACTMEM213
Ontologies - Pathways
QuickGOA2RRL7
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM213
Atlas of Cancer Signalling NetworkTMEM213
Wikipedia pathwaysTMEM213
Orthology - Evolution
OrthoDB155006
GeneTree (enSembl)ENSG00000214128
Phylogenetic Trees/Animal Genes : TreeFamTMEM213
Homologs : HomoloGeneTMEM213
Homology/Alignments : Family Browser (UCSC)TMEM213
Gene fusions - Rearrangements
Fusion : QuiverTMEM213
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM213 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM213
dbVarTMEM213
ClinVarTMEM213
MonarchTMEM213
1000_GenomesTMEM213 
Exome Variant ServerTMEM213
GNOMAD BrowserENSG00000214128
Varsome BrowserTMEM213
ACMGTMEM213 variants
VarityA2RRL7
Genomic Variants (DGV)TMEM213 [DGVbeta]
DECIPHERTMEM213 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM213 
Mutations
ICGC Data PortalTMEM213 
TCGA Data PortalTMEM213 
Broad Tumor PortalTMEM213
OASIS PortalTMEM213 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM213  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM213
Mutations and Diseases : HGMDTMEM213
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM213
DgiDB (Drug Gene Interaction Database)TMEM213
DoCM (Curated mutations)TMEM213
CIViC (Clinical Interpretations of Variants in Cancer)TMEM213
Cancer3DTMEM213
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM213
MedgenTMEM213
Genetic Testing Registry TMEM213
NextProtA2RRL7 [Medical]
GENETestsTMEM213
Target ValidationTMEM213
Huge Navigator TMEM213 [HugePedia]
ClinGenTMEM213
Clinical trials, drugs, therapy
MyCancerGenomeTMEM213
Protein Interactions : CTDTMEM213
Pharm GKB GenePA162406494
PharosA2RRL7
Clinical trialTMEM213
Miscellaneous
canSAR (ICR)TMEM213
HarmonizomeTMEM213
DataMed IndexTMEM213
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM213
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:26:01 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.