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TMEM214 (transmembrane protein 214)

Identity

Alias_symbol (synonym)FLJ20254
Other alias-
HGNC (Hugo) TMEM214
LocusID (NCBI) 54867
Atlas_Id 74880
Location 2p23.3  [Link to chromosome band 2p23]
Location_base_pair Starts at 27255774 and ends at 27264565 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
PFN1 (17p13.2) / TMEM214 (2p23.3)TMEM214 (2p23.3) / DRG1 (22q12.2)TMEM214 (2p23.3) / SPRYD4 (12q13.3)
TMEM214 (2p23.3) / TMEM214 (2p23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM214   25983
Cards
Entrez_Gene (NCBI)TMEM214  54867  transmembrane protein 214
Aliases
GeneCards (Weizmann)TMEM214
Ensembl hg19 (Hinxton)ENSG00000119777 [Gene_View]  chr2:27255774-27264565 [Contig_View]  TMEM214 [Vega]
Ensembl hg38 (Hinxton)ENSG00000119777 [Gene_View]  chr2:27255774-27264565 [Contig_View]  TMEM214 [Vega]
ICGC DataPortalENSG00000119777
TCGA cBioPortalTMEM214
AceView (NCBI)TMEM214
Genatlas (Paris)TMEM214
WikiGenes54867
SOURCE (Princeton)TMEM214
Genetics Home Reference (NIH)TMEM214
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM214  -     chr2:27255774-27264565 +  2p23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM214  -     2p23.3   [Description]    (hg38-Dec_2013)
EnsemblTMEM214 - 2p23.3 [CytoView hg19]  TMEM214 - 2p23.3 [CytoView hg38]
Mapping of homologs : NCBITMEM214 [Mapview hg19]  TMEM214 [Mapview hg38]
OMIM615301   
Gene and transcription
Genbank (Entrez)AA460659 AF289555 AK000261 AK074981 AK097001
RefSeq transcript (Entrez)NM_001083590 NM_017727
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)TMEM214
Cluster EST : UnigeneHs.533934 [ NCBI ]
CGAP (NCI)Hs.533934
Alternative Splicing GalleryENSG00000119777
Gene ExpressionTMEM214 [ NCBI-GEO ]   TMEM214 [ EBI - ARRAY_EXPRESS ]   TMEM214 [ SEEK ]   TMEM214 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM214 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54867
GTEX Portal (Tissue expression)TMEM214
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6NUQ4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6NUQ4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6NUQ4
Splice isoforms : SwissVarQ6NUQ4
PhosPhoSitePlusQ6NUQ4
Domains : Interpro (EBI)DUF2359_TMEM214   
Domain families : Pfam (Sanger)DUF2359 (PF10151)   
Domain families : Pfam (NCBI)pfam10151   
Conserved Domain (NCBI)TMEM214
DMDM Disease mutations54867
Blocks (Seattle)TMEM214
SuperfamilyQ6NUQ4
Human Protein AtlasENSG00000119777
Peptide AtlasQ6NUQ4
HPRD07887
IPIIPI00477118   IPI00843881   IPI00909345   IPI01012740   IPI00183297   IPI00893778   IPI00893374   IPI00893519   IPI00893080   
Protein Interaction databases
DIP (DOE-UCLA)Q6NUQ4
IntAct (EBI)Q6NUQ4
FunCoupENSG00000119777
BioGRIDTMEM214
STRING (EMBL)TMEM214
ZODIACTMEM214
Ontologies - Pathways
QuickGOQ6NUQ4
Ontology : AmiGOcytoplasm  endoplasmic reticulum  endoplasmic reticulum membrane  Golgi apparatus  cytoplasmic microtubule  apoptotic process  integral component of membrane  
Ontology : EGO-EBIcytoplasm  endoplasmic reticulum  endoplasmic reticulum membrane  Golgi apparatus  cytoplasmic microtubule  apoptotic process  integral component of membrane  
NDEx NetworkTMEM214
Atlas of Cancer Signalling NetworkTMEM214
Wikipedia pathwaysTMEM214
Orthology - Evolution
OrthoDB54867
GeneTree (enSembl)ENSG00000119777
Phylogenetic Trees/Animal Genes : TreeFamTMEM214
HOVERGENQ6NUQ4
HOGENOMQ6NUQ4
Homologs : HomoloGeneTMEM214
Homology/Alignments : Family Browser (UCSC)TMEM214
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM214 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM214
dbVarTMEM214
ClinVarTMEM214
1000_GenomesTMEM214 
Exome Variant ServerTMEM214
ExAC (Exome Aggregation Consortium)TMEM214 (select the gene name)
Genetic variants : HAPMAP54867
Genomic Variants (DGV)TMEM214 [DGVbeta]
DECIPHER (Syndromes)2:27255774-27264565  ENSG00000119777
CONAN: Copy Number AnalysisTMEM214 
Mutations
ICGC Data PortalTMEM214 
TCGA Data PortalTMEM214 
Broad Tumor PortalTMEM214
OASIS PortalTMEM214 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM214  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM214
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM214
DgiDB (Drug Gene Interaction Database)TMEM214
DoCM (Curated mutations)TMEM214 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM214 (select a term)
intoGenTMEM214
Cancer3DTMEM214(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615301   
Orphanet
MedgenTMEM214
Genetic Testing Registry TMEM214
NextProtQ6NUQ4 [Medical]
TSGene54867
GENETestsTMEM214
Huge Navigator TMEM214 [HugePedia]
snp3D : Map Gene to Disease54867
BioCentury BCIQTMEM214
ClinGenTMEM214
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54867
Chemical/Pharm GKB GenePA162406505
Clinical trialTMEM214
Miscellaneous
canSAR (ICR)TMEM214 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM214
EVEXTMEM214
GoPubMedTMEM214
iHOPTMEM214
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:48:42 CET 2017

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