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TMEM215 (transmembrane protein 215)

Identity

Other alias-
HGNC (Hugo) TMEM215
LocusID (NCBI) 401498
Atlas_Id 74881
Location 9p21.1  [Link to chromosome band 9p21]
Location_base_pair Starts at 32783499 and ends at 32789201 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM215   33816
Cards
Entrez_Gene (NCBI)TMEM215  401498  transmembrane protein 215
Aliases
GeneCards (Weizmann)TMEM215
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:32783499-32789201 [Contig_View]  TMEM215 [Vega]
TCGA cBioPortalTMEM215
AceView (NCBI)TMEM215
Genatlas (Paris)TMEM215
WikiGenes401498
SOURCE (Princeton)TMEM215
Genetics Home Reference (NIH)TMEM215
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM215  -     chr9:32783499-32789201 +  9p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM215  -     9p21.1   [Description]    (hg19-Feb_2009)
EnsemblTMEM215 - 9p21.1 [CytoView hg19]  TMEM215 - 9p21.1 [CytoView hg38]
Mapping of homologs : NCBITMEM215 [Mapview hg19]  TMEM215 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125320 BM681172 BX647550 CR749589
RefSeq transcript (Entrez)NM_212558
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM215
Cluster EST : UnigeneHs.522063 [ NCBI ]
CGAP (NCI)Hs.522063
Gene ExpressionTMEM215 [ NCBI-GEO ]   TMEM215 [ EBI - ARRAY_EXPRESS ]   TMEM215 [ SEEK ]   TMEM215 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM215 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401498
GTEX Portal (Tissue expression)TMEM215
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ68D42   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ68D42  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ68D42
Splice isoforms : SwissVarQ68D42
PhosPhoSitePlusQ68D42
Domains : Interpro (EBI)TMEM215   
Domain families : Pfam (Sanger)TMEM215 (PF15746)   
Domain families : Pfam (NCBI)pfam15746   
Conserved Domain (NCBI)TMEM215
DMDM Disease mutations401498
Blocks (Seattle)TMEM215
SuperfamilyQ68D42
Peptide AtlasQ68D42
HPRD17393
IPIIPI00414349   
Protein Interaction databases
DIP (DOE-UCLA)Q68D42
IntAct (EBI)Q68D42
BioGRIDTMEM215
STRING (EMBL)TMEM215
ZODIACTMEM215
Ontologies - Pathways
QuickGOQ68D42
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM215
Atlas of Cancer Signalling NetworkTMEM215
Wikipedia pathwaysTMEM215
Orthology - Evolution
OrthoDB401498
Phylogenetic Trees/Animal Genes : TreeFamTMEM215
HOVERGENQ68D42
HOGENOMQ68D42
Homologs : HomoloGeneTMEM215
Homology/Alignments : Family Browser (UCSC)TMEM215
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM215 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM215
dbVarTMEM215
ClinVarTMEM215
1000_GenomesTMEM215 
Exome Variant ServerTMEM215
ExAC (Exome Aggregation Consortium)TMEM215 (select the gene name)
Genetic variants : HAPMAP401498
Genomic Variants (DGV)TMEM215 [DGVbeta]
DECIPHERTMEM215 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM215 
Mutations
ICGC Data PortalTMEM215 
TCGA Data PortalTMEM215 
Broad Tumor PortalTMEM215
OASIS PortalTMEM215 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM215  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM215
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM215
DgiDB (Drug Gene Interaction Database)TMEM215
DoCM (Curated mutations)TMEM215 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM215 (select a term)
intoGenTMEM215
Cancer3DTMEM215(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM215
Genetic Testing Registry TMEM215
NextProtQ68D42 [Medical]
TSGene401498
GENETestsTMEM215
Target ValidationTMEM215
Huge Navigator TMEM215 [HugePedia]
snp3D : Map Gene to Disease401498
BioCentury BCIQTMEM215
ClinGenTMEM215
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401498
Chemical/Pharm GKB GenePA162406544
Clinical trialTMEM215
Miscellaneous
canSAR (ICR)TMEM215 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM215
EVEXTMEM215
GoPubMedTMEM215
iHOPTMEM215
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:41:51 CEST 2017

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