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TMEM217 (transmembrane protein 217)

Identity

Alias (NCBI)C6orf128
dJ355M6.2
HGNC (Hugo) TMEM217
HGNC Alias symbdJ355M6.2
HGNC Previous nameC6orf128
HGNC Previous namechromosome 6 open reading frame 128
LocusID (NCBI) 221468
Atlas_Id 74883
Location 6p21.2  [Link to chromosome band 6p21]
Location_base_pair Starts at 37212181 and ends at 37257599 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DNAH8 (6p21.2) / TMEM217 (6p21.2)LRP8 (1p32.3) / TMEM217 (6p21.2)LRP8 TMEM217
DNAH8 TMEM217

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TMEM217   21238
Cards
Entrez_Gene (NCBI)TMEM217    transmembrane protein 217
AliasesC6orf128; dJ355M6.2
GeneCards (Weizmann)TMEM217
Ensembl hg19 (Hinxton)ENSG00000172738 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172738 [Gene_View]  ENSG00000172738 [Sequence]  chr6:37212181-37257599 [Contig_View]  TMEM217 [Vega]
ICGC DataPortalENSG00000172738
TCGA cBioPortalTMEM217
AceView (NCBI)TMEM217
Genatlas (Paris)TMEM217
SOURCE (Princeton)TMEM217
Genetics Home Reference (NIH)TMEM217
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM217  -     chr6:37212181-37257599 -  6p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM217  -     6p21.2   [Description]    (hg19-Feb_2009)
GoldenPathTMEM217 - 6p21.2 [CytoView hg19]  TMEM217 - 6p21.2 [CytoView hg38]
ImmunoBaseENSG00000172738
Genome Data Viewer NCBITMEM217 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK098666 AW137001 AW188099 BC009625 BC026012
RefSeq transcript (Entrez)NM_001162900 NM_001286401 NM_001371555 NM_145316
Consensus coding sequences : CCDS (NCBI)TMEM217
Gene ExpressionTMEM217 [ NCBI-GEO ]   TMEM217 [ EBI - ARRAY_EXPRESS ]   TMEM217 [ SEEK ]   TMEM217 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM217 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM217 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)221468
GTEX Portal (Tissue expression)TMEM217
Human Protein AtlasENSG00000172738-TMEM217 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N7C4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N7C4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N7C4
PhosPhoSitePlusQ8N7C4
Domains : Interpro (EBI)DUF4534   
Domain families : Pfam (Sanger)DUF4534 (PF15049)   
Domain families : Pfam (NCBI)pfam15049   
Conserved Domain (NCBI)TMEM217
SuperfamilyQ8N7C4
AlphaFold pdb e-kbQ8N7C4   
Human Protein Atlas [tissue]ENSG00000172738-TMEM217 [tissue]
HPRD12848
Protein Interaction databases
DIP (DOE-UCLA)Q8N7C4
IntAct (EBI)Q8N7C4
BioGRIDTMEM217
STRING (EMBL)TMEM217
ZODIACTMEM217
Ontologies - Pathways
QuickGOQ8N7C4
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM217
Atlas of Cancer Signalling NetworkTMEM217
Wikipedia pathwaysTMEM217
Orthology - Evolution
OrthoDB221468
GeneTree (enSembl)ENSG00000172738
Phylogenetic Trees/Animal Genes : TreeFamTMEM217
Homologs : HomoloGeneTMEM217
Homology/Alignments : Family Browser (UCSC)TMEM217
Gene fusions - Rearrangements
Fusion : QuiverTMEM217
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM217 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM217
dbVarTMEM217
ClinVarTMEM217
MonarchTMEM217
1000_GenomesTMEM217 
Exome Variant ServerTMEM217
GNOMAD BrowserENSG00000172738
Varsome BrowserTMEM217
ACMGTMEM217 variants
VarityQ8N7C4
Genomic Variants (DGV)TMEM217 [DGVbeta]
DECIPHERTMEM217 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM217 
Mutations
ICGC Data PortalTMEM217 
TCGA Data PortalTMEM217 
Broad Tumor PortalTMEM217
OASIS PortalTMEM217 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM217  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTMEM217
Mutations and Diseases : HGMDTMEM217
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTMEM217
DgiDB (Drug Gene Interaction Database)TMEM217
DoCM (Curated mutations)TMEM217
CIViC (Clinical Interpretations of Variants in Cancer)TMEM217
Cancer3DTMEM217
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM217
MedgenTMEM217
Genetic Testing Registry TMEM217
NextProtQ8N7C4 [Medical]
GENETestsTMEM217
Target ValidationTMEM217
Huge Navigator TMEM217 [HugePedia]
ClinGenTMEM217
Clinical trials, drugs, therapy
MyCancerGenomeTMEM217
Protein Interactions : CTDTMEM217
Pharm GKB GenePA162406568
PharosQ8N7C4
Clinical trialTMEM217
Miscellaneous
canSAR (ICR)TMEM217
HarmonizomeTMEM217
DataMed IndexTMEM217
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTMEM217
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:01 CEST 2021

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