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TMEM218 (transmembrane protein 218)

Identity

Other alias-
HGNC (Hugo) TMEM218
LocusID (NCBI) 219854
Atlas_Id 74884
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 124964266 and ends at 124981604 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
TMEM218 (11q24.2) / STRADA (17q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TMEM218   27344
Cards
Entrez_Gene (NCBI)TMEM218  219854  transmembrane protein 218
Aliases
GeneCards (Weizmann)TMEM218
Ensembl hg19 (Hinxton) [Gene_View]  chr11:124964266-124981604 [Contig_View]  TMEM218 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:124964266-124981604 [Contig_View]  TMEM218 [Vega]
TCGA cBioPortalTMEM218
AceView (NCBI)TMEM218
Genatlas (Paris)TMEM218
WikiGenes219854
SOURCE (Princeton)TMEM218
Genetics Home Reference (NIH)TMEM218
Genomic and cartography
GoldenPath hg19 (UCSC)TMEM218  -     chr11:124964266-124981604 -  11q24.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TMEM218  -     11q24.2   [Description]    (hg38-Dec_2013)
EnsemblTMEM218 - 11q24.2 [CytoView hg19]  TMEM218 - 11q24.2 [CytoView hg38]
Mapping of homologs : NCBITMEM218 [Mapview hg19]  TMEM218 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA459752 AA781367 AI680968 AK091324 AL833215
RefSeq transcript (Entrez)NM_001080546 NM_001258238 NM_001258239 NM_001258240 NM_001258241 NM_001258242 NM_001258243 NM_001258244 NM_001258245 NM_001258246 NM_001258247
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929381
Consensus coding sequences : CCDS (NCBI)TMEM218
Cluster EST : UnigeneHs.731899 [ NCBI ]
CGAP (NCI)Hs.731899
Gene ExpressionTMEM218 [ NCBI-GEO ]   TMEM218 [ EBI - ARRAY_EXPRESS ]   TMEM218 [ SEEK ]   TMEM218 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM218 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219854
GTEX Portal (Tissue expression)TMEM218
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2RU14   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA2RU14  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA2RU14
Splice isoforms : SwissVarA2RU14
PhosPhoSitePlusA2RU14
Domains : Interpro (EBI)Tmem218   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM218
DMDM Disease mutations219854
Blocks (Seattle)TMEM218
SuperfamilyA2RU14
Peptide AtlasA2RU14
IPIIPI00150515   IPI00980451   IPI00922287   IPI00983810   IPI00976719   
Protein Interaction databases
DIP (DOE-UCLA)A2RU14
IntAct (EBI)A2RU14
BioGRIDTMEM218
STRING (EMBL)TMEM218
ZODIACTMEM218
Ontologies - Pathways
QuickGOA2RU14
Ontology : AmiGOprotein binding  integral component of membrane  
Ontology : EGO-EBIprotein binding  integral component of membrane  
NDEx NetworkTMEM218
Atlas of Cancer Signalling NetworkTMEM218
Wikipedia pathwaysTMEM218
Orthology - Evolution
OrthoDB219854
Phylogenetic Trees/Animal Genes : TreeFamTMEM218
HOVERGENA2RU14
HOGENOMA2RU14
Homologs : HomoloGeneTMEM218
Homology/Alignments : Family Browser (UCSC)TMEM218
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM218 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM218
dbVarTMEM218
ClinVarTMEM218
1000_GenomesTMEM218 
Exome Variant ServerTMEM218
ExAC (Exome Aggregation Consortium)TMEM218 (select the gene name)
Genetic variants : HAPMAP219854
Genomic Variants (DGV)TMEM218 [DGVbeta]
DECIPHER (Syndromes)11:124964266-124981604  
CONAN: Copy Number AnalysisTMEM218 
Mutations
ICGC Data PortalTMEM218 
TCGA Data PortalTMEM218 
Broad Tumor PortalTMEM218
OASIS PortalTMEM218 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTMEM218  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTMEM218
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TMEM218
DgiDB (Drug Gene Interaction Database)TMEM218
DoCM (Curated mutations)TMEM218 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM218 (select a term)
intoGenTMEM218
Cancer3DTMEM218(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTMEM218
Genetic Testing Registry TMEM218
NextProtA2RU14 [Medical]
TSGene219854
GENETestsTMEM218
Huge Navigator TMEM218 [HugePedia]
snp3D : Map Gene to Disease219854
BioCentury BCIQTMEM218
ClinGenTMEM218
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219854
Chemical/Pharm GKB GenePA162406569
Clinical trialTMEM218
Miscellaneous
canSAR (ICR)TMEM218 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM218
EVEXTMEM218
GoPubMedTMEM218
iHOPTMEM218
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:48:43 CET 2017

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